Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01755 ATGGAGTATGTTGCATTACTTGGCAAGGTGTTGCCATATCTAAAGCCGATACTGTATCAACTTCGGCCTTACGAAATCAGAGTTGGAGAACTAACCAAAGGTGTTAATAAGCTGCGGAAAGAGAGAAAAAGGGTGCAAAATAAAGTTAGAGAGGAAGAAAAACGAAATGGTAGAGCTATTGATGATGATGTGATTAAATGGTTGGAAGAGGTGGATGGAGTCATTTCGGAGTATGATGATTTCTGGGAGGATGAAGCCCGTCCCTATGCTGTGTGTTCTGATGGTTACCTTCCTAAACCCGCTATAAGGTATAGTCTAAGCAGAGTTGTGAATGGTATTACAAGGAGGGTTAATGTTCTACTGCAGACTGCGAAACATGATGATTTTTCTTATTGGTTGGGCACACCTTCCTTCGATGCTGATTTTGATAACATTAGGTATGAGTTGTTTGAATCAAGAATTCAAACTGTGGGTGATATTTTGGCAGCATTGGCAGACTCGAATGTTGAAGTTATTGGAGTTTATGGGTGGAATGGAGTGGGGAAAACTAGTTTGATAAAAGAGGTTGCTAAGGAAGTAAAAGGTAGTATGTTTGATGAGGTGATTATGGTGAATGTAACTAGTTGTCCTGACATTCGAAGTATTCAAGGACAAATTGCTGACAAGTTGGGGATGAAATTGGAAGAGGAATCTGAGAATGGAAGAGCAGCTTGCTTACGGGGAAGATTAAAGAACCCAAAGGAGAAAACCCTTATAATCCTAGATAATATGGGGGTGAAACTGGACTTCAATGTGTTGGGAATTCCATCTGAGAATAATGGCGGTAGCCAGATGAATTACAAAATGAAAAACCCTTCGGCCCATCATAGCTATGCAATGAAAGCAGAAGAATTTGATGGCTCTAGTTTGATGAAGACAGAGGAACCTCTTGCTAGGCACAAAGGATGCAAAATTTTGATGATTTCTGATAGTAAACAGATTTTGCTAAGCCAGATGGAGGGGAAAGGAATCCATACTTTTTGTGTAAAAGCATTAAGGGAAAAGGAGGCAGAGACGATGTTTAAGAACATGGCTGAAATAGGTGATGGAAATTCTATGCTTGAAACATTAGCCACTCAAATTGCCAAGAAGTGTAAAGGGTTGCCCTTGACGATTGTTACAACTGCAAATGCATTAAAAAACAAGAGTCTTCTGGTATGGGAGGATGCATATCGAAAGCTTGAAAGGCAAAACTTAACAGCAATGCCTGAGTTTTCCACAAAGCTGAGTTATGAACTTCTACAAGATGAGGAGCTCAAGCACACTTTCTTAATTTGTGCTCGTATGAATCATGATGCATCAATTACTGACTTGGTGAGATATTGCGTCGGTGTTGGTTTACTTCAAGGAATTTACACAGTAAGGGAGGCTAGAGATAGAGTACACGTGTTGGTTGGAAAGTTGAAAGAGTTGAGTTTGTTGTCTGATAGTTTTTCAAGTGATCGTTTCACCATGCAAGATATTGTCCGTGATGCAGCTTTGTCAATAGCTACTCAGCAGATGAACGCCTTTGCATTGACAAATGGTAAACTAGATGAATGGCCCGACACAGACAAGCTTGAAAGGTACACTGGTATTTCCTTACATTATTGTGATTTGACTGATATCATGAAGGAGTTTCCTGAAAGCATAAACTGTTCCAGACTTAGAGTTTTTCGTCTTGACAATAAGGATCCACTTCTTGAAATACCAGACAACTTTTTTAATGGAATGAAAGAACTCCGAGTGTTAATATTGATTGGCATTCATCTATCATCCTTACCTTCCTCAATTAAATGCTTAAAAAAACTCAAAATGCTTTGTTTGGAGAGATGCAAGTTATCTGAGCATTTATCCATCATTGGAGAGTTGGAGAAATTACGAGTTCTTAGTTTATCAGGATCTGATTTTGATAAATTGCCCGTGGAATTGTGCCAGTTAGCTAAGCTACAAATTTTGGACATAAGTGATTGTTTTAAGCTTAAAATTATTCCTGCTGGTGTATTGTCAAGTTTGACTAGTTTGGAAGAGTTCTATGTGAGAAACAGCCCAATTCAATGGATAGATGAAGAACAGGGAAATTCTAGTCTTTCTGAGCTGAGGCATCTGATTCAGTTAAGAATACTTGATATACAGATCCCAAAAATTACCCATTTGCCGAAGAACTTGTTCTTCGACAAGTTGGATACGTACAGGATCATCGTTAGTGAATATTTTGATGCATATCCAGTGTGGGATTTCAAGATGCTAGAGCTGTTTGAATCATCAAGATATTTGGCACTTCATCAAGAAAACGGCTTTGACATTCATTATCAAAAGGAGCTCAAAATACTATTTGGAAGAGTTGAAAATTTGTTGTTGGGACAACTAAATGATGTTGAGGATATTTTCTATGAATTGAATTATGAAGGATTTCCATATCTAAAATATTTGTCCATTGTAAGTAACTCGAAAGTTAAGTCCATCATCAATTCAAAGAACCTTAAACATCCTGAGAAAGCATTTCCCAGATTAGAGTCGTTGTTTCTCTATGAAGTCAATAACATGAAGCATATATGTCAGATTCAGCTTACACATGATTCATTTTGCAAATTGAAAATCATCAAGCTCAAAATATGTGGTCAATTGAAGAATGTTTTCTTCTCTTCTATGATCAAACATATTTCTACACTTGAAACAATTGAAATTTCTGAGTGTAACTCTTTGACGGAGATTATTACCTTGGAAACGGATAGAATTGTTATCATAGATAAAATCAAGTTTCCAGAACTGCGCACTTTGACACTACAATCTTTGCCTGAATTTATTGGATTCTACAATGATGATGCATCAACAAGAGAAGAAGTGCCTAATAGGAAGCCCAATGAACTCTTTGATGAAAAGTCTGATAAATCTTCAAAGCCTTTTTGTGAGTGA 2934 0.3742 MEYVALLGKVLPYLKPILYQLRPYEIRVGELTKGVNKLRKERKRVQNKVREEEKRNGRAIDDDVIKWLEEVDGVISEYDDFWEDEARPYAVCSDGYLPKPAIRYSLSRVVNGITRRVNVLLQTAKHDDFSYWLGTPSFDADFDNIRYELFESRIQTVGDILAALADSNVEVIGVYGWNGVGKTSLIKEVAKEVKGSMFDEVIMVNVTSCPDIRSIQGQIADKLGMKLEEESENGRAACLRGRLKNPKEKTLIILDNMGVKLDFNVLGIPSENNGGSQMNYKMKNPSAHHSYAMKAEEFDGSSLMKTEEPLARHKGCKILMISDSKQILLSQMEGKGIHTFCVKALREKEAETMFKNMAEIGDGNSMLETLATQIAKKCKGLPLTIVTTANALKNKSLLVWEDAYRKLERQNLTAMPEFSTKLSYELLQDEELKHTFLICARMNHDASITDLVRYCVGVGLLQGIYTVREARDRVHVLVGKLKELSLLSDSFSSDRFTMQDIVRDAALSIATQQMNAFALTNGKLDEWPDTDKLERYTGISLHYCDLTDIMKEFPESINCSRLRVFRLDNKDPLLEIPDNFFNGMKELRVLILIGIHLSSLPSSIKCLKKLKMLCLERCKLSEHLSIIGELEKLRVLSLSGSDFDKLPVELCQLAKLQILDISDCFKLKIIPAGVLSSLTSLEEFYVRNSPIQWIDEEQGNSSLSELRHLIQLRILDIQIPKITHLPKNLFFDKLDTYRIIVSEYFDAYPVWDFKMLELFESSRYLALHQENGFDIHYQKELKILFGRVENLLLGQLNDVEDIFYELNYEGFPYLKYLSIVSNSKVKSIINSKNLKHPEKAFPRLESLFLYEVNNMKHICQIQLTHDSFCKLKIIKLKICGQLKNVFFSSMIKHISTLETIEISECNSLTEIITLETDRIVIIDKIKFPELRTLTLQSLPEFIGFYNDDASTREEVPNRKPNELFDEKSDKSSKPFCE 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01755 977 Gene3D - 344 428 IPR042197 -
Spst4g01755 977 SMART AAA_5 168 364 IPR003593 GO:0016887
Spst4g01755 977 SMART LRR_typ_2 584 606 IPR003591 -
Spst4g01755 977 SMART LRR_typ_2 709 732 IPR003591 -
Spst4g01755 977 SMART LRR_typ_2 678 701 IPR003591 -
Spst4g01755 977 SMART LRR_typ_2 630 653 IPR003591 -
Spst4g01755 977 SUPERFAMILY L domain-like 524 937 - -
Spst4g01755 977 Coils Coil 28 62 - -
Spst4g01755 977 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 439 IPR027417 -
Spst4g01755 977 Gene3D - 144 335 IPR027417 -
Spst4g01755 977 Pfam NB-ARC domain 156 269 IPR002182 GO:0043531
Spst4g01755 977 Pfam NB-ARC domain 309 413 IPR002182 GO:0043531
Spst4g01755 977 MobiDBLite consensus disorder prediction 951 977 - -
Spst4g01755 977 PRINTS Disease resistance protein signature 171 186 - -
Spst4g01755 977 PRINTS Disease resistance protein signature 892 908 - -
Spst4g01755 977 PRINTS Disease resistance protein signature 244 258 - -
Spst4g01755 977 PRINTS Disease resistance protein signature 378 392 - -
Spst4g01755 977 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 30 943 - -
Spst4g01755 977 Gene3D Ribonuclease Inhibitor 551 944 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01755 Spst-Chr4 57610834 57614133 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01755 548 739 Receptor kinase-like Gene Family AT1G75640 29.545 5.17e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01755 - - ccaj:109802431 1385.55