Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01754 ATGAAGAGATTGAAAGAGATATGGGCCAAATTTCCTCTACGTTCCTTTGGGAAACTGGATGCATTGATCATTGACGGGTGTAATAAGCTTGAACATGTTTTTCCTTCTTATATGGTCGGAAGATTTCAGAGTGTATGCAACTTGAAAGTTACTGATTGCAAGTCATTGAAAGTGATATTTGACCTCAAAGGTTGTGGTTGTGGAAAACCTGATGCTGAAGATATCACCAATTTACAAAATTTTCATGTAGAAGCACTGCCAAAATTGGAGCATGTATGGAACAAAGACCCGAAAGGGATTCTTAACTTCAAAAATTTGAAAAGTATATTAGTTCAAGAATGTCTCCATTTAGAATATATATTTCCACTTTCTATAGCCATGGATCTTGAGAAACTGGAATGCCTTGAGGTTCAGAATTGTGGTCAGTTGAAGGAAATTGTTTCCAGGGTGGAAGCAAACAACATGAGCAGCATTTCGTTCGAATTTCCTAAACTGACCACTGCCAGGTTTTTGAAACTGCCAAACCTTGAGAGTTTCTACGGGGGAACACATGAAATATGTTGTTCAGCCCTAAATAACTTGTCTGTGGAACTTTGTCATAAGCTTGAACTTTTCAGAAAAGAAAACACAAATTCAGAAATAGAGCCAGTCTTCTTGCCTGAAAAGGTAATCTACAACTTGAAGTCCATGCAAATAGAGCCACAAGATGCAGATTGGTTAATGACATATATGGGGAACTACCGGATGCACAAATTAAAAGAGTTTCAATTATCTAGACTAGTGGATACTAAGATTCTATATTTTTTCCTTCACAGAAATCCTAACCTAAAAAGTCTACTGTTGAGTAATTGTTTCTTTGAGCAGTTACTACCCCCAAGAGGCCTTGGTGAAGAAAATTTGGGGGTTGTTCCAAAGCTCAAATGCTTAAAGTTAATGAACTTACCTTCACTTAAGATGATAGGCTTTGAAGAAGACACAATACTCTTTCAAAAGCTAGAATGCTTGATTTTAAAGGAATGTCCATGTCTAAACAACATACCTTCCTCAATGTCTTTCACATACTTGACAAATCTGGAAGTCAGTAACTGCAATAAATTGAGCTATTTAATGACAACATCAACTGCTAAAAGCTTGCTTCAACTCACCACCATGAAGGTAACTCAATGTGAATCGATGGAAACCATTGTGTCAGATCAAGAAAATAAACGAGAAATTATTTCTGAAAAGTTGAAGGAAACAAAGCCACGGATTAGTTTCAAGCAATTGAAGGCAATAGAACTCATAACTCTGCATGCACTTGAAAGCTTCTATAGTTCCTTCCGTTGCTCCTTTGAGTTTCCCTCGTTGGAAAATTTTGTTGTGAGTGAATGTGGAAATTTGAAAAGCTTCACATATAATGATGAAGACAAGGCACCAATTTTGCAACAAATATGTGATAGAGACGAAACTGAGGAAAAACAATATTATTGGAAAGGTGACTTAAATGCTACGATAAAACATATGTACCAGATACGGGCTATTGTTCCAGACAGGATGGAAACATACAATCCTTACACAATACTCGAAAGCTCTTATTTGAAGACTTTGAAACTTGTGAATATTGAAGATGGCAAGCCTGCTATTCCAACTATTGTTTTTCCTGGACTTAAGAATCTGGAAGAATTAGAAGTAAGCTGCAGCAATGTAGAAGTAATATTTGATATAATGAATGCTGATATGAAGGGATATACCCTTCCGTTGAAGAAATTGACTTTGTGTAAGTTGCCAATGTTGACACACGTATGGAATGAGGATCATGAAGGATTTCTCAGTTTTCAAAATCTGCGGGAAGTGCATGTTAGTCATTGTAGCAATCTGGAAACTTTGTTTGTTATGGAGTTGGCTAAAAGAGTTGAGAAGCTTGAGAAACTTGAAATAAGGCACTGTGAAAAGTTTCTAAAAGTTGTTGAAGAAGATAGAGCAACAACAGAAGCAGCAGAAGAATTTTCATTTCCTCGTTTAACCTCATTGGATTTGCGTATGTTACCACAGCTCACTTGCTTTTATCCTGGAAAGGCTATTTTCATGCTGGAGTCATTGAAGCTTGATTTGAAAAACGCTATGATGCTATGTAACAGAAATTTCCCAGAAGACATGCTTCATGAATTAGTCGAACTTGAGCTGGATTTTGATGATGTCAGTGAGGTATCGAATTTTCCATTTGAATTCTTTGAGAAAGCATCCAATTTAGAGTATCTTCAAATAAGACGATGCAGAGGTCTTGAGGAGTTATTCCCTTCTCAACCTCAACTATGTGAAATCAGAATGCCTGCACACCTAACAACAATAGTCCATTCGGCAGTGTCATTCTCCAATCTAAAACAGTTGTCTGTAAAATATTGCCATGGATTGAAGCATTTATTTACATCCTCAACAGCAAGAAAGTTGGTGCACCTTGAAGAGATGTACGTAGTGAAATGTGATTCAATAGAAAAAATATTGGCAAAGGAGCTAAACGAAACTACTTCAGAAGCCATAAAATTTGAGCGACTCAACACAATAATTCTAGATTCTTTATCAAGCCTCAAATGTTTTTATTCGGGTAGTGACACTCTACAATTACCATCTCTGATAAGATTGCTTGTGTGGAAATGCACTAAGATGAAGATTTTCTCCAGAGGAGAGATACAAGCGCAAACCTTTTTAGGAATTCAGGTCTCATTAGATCCAAAAGACGATTTGCTCTTCCACCAAGATCTTAACACCACTGTGAAGATGATCCAACGACAGGAATTTTTTAAAGCCTTGGGTGAAAATATTCATGAGTTAGTAGCAGACAGTCAGGTTAATGTTGCCGTTGGTCTACAAGACAAATGGTTGCGCAATTTGGGAGCTTTGAAGCTGGACAAGTGTATTCTACCATATGCCATTCCGTCTTGTATTGTTCCTAATTTAAACAACTTAAAAGAATTGGAAGTGCAGGATAGTGACAAAGTTGAGGTAATATTTGACATGAATGACATTGAGATAATGGAAACAGAATCCAAGTTGAAGAGATTGACTTTAAATGGGCTATCTAAACTAGTGCGTGTGTGGGAAAAGAACAGGCAAGGGGTTCTCATCTTTCAAAATCTGCAAGAGGTTGTTGTTAATAATTGTGAAAGCTTGCAAACTCTATTTCCTGCTTCCCTGGCCAAAAATCTTAAGGAGCTTGAGAAACTTGAAATACATTATTGTCTTAAATTGCAAGAAATTGTTGAAAATGAAGAAGACACAGCAGCAAACATAACAGAAAAGTTTGTGTTCCCTTGTTTAAAGACGCTGGTTCTTTGTGACTTGCCACAGGTCACATACGTTTGCCCTCAAACATTCTCCCTAGGATGTCCAGCCTTAAAATACTTATTTGTGTTGCATTGTGATGAGTTGGAGTTATTTCAAAGTGCACATCCCGTAGGTGAAGGAGAAGGTGGGGGTACTTCAATTACCACACAGCCTCTTATTTCAGATCTGAAGGACATTTCCTACTTGGAGAAATTTGGACTTGATTGGAAACACATTTCAGCATTATGCTCAAGGTTTCGGTCAGAGCAATTTATGGAAGGCCTCAAATATTTAAATGAAATTCACCTGTATTATGGCGCGGATGTGAATAAGAAGCATATCTCACCCGTTGAAATACTCCAAAGGGCACCCAATTTAATTGAAATTAGTATAGAAGATGGCAATAGTCCTGAGATATTCCATGCACAAAACACCATCGTTGATGAAGATGGGATGCTTGGACGGTTTAAAACATTGACACTGGAAAATGTGTCCGCACTCCAGTCCATGGAGTCAAAAGACTCGTCATGGTTAAACACAATCTGTGAGAAGGTCCAGGAATTGAATGTTGTGAGATGTCCTCATTTAACAACATTAGTACATAAAGTGTCTGTCTCCTGTCTAAGAAAAGTGTCTATATCCAACTGTCCCGACTTACAGTATTTGTTTCCAACTTCAGTTGCCAAGAAGTTACTGAATCTTGAGGAGATCACAGTTCAGGAATGTAAATCACTGAAAGAAATAGTGGCTAAAGAGGGAGATGAAACTTTTGAGGCCATTAAATTTGAGAGACTTAAAATCATTGCTCTAGATTCTTTACCAAGTTTGATTTGTTTCTATTCGGGAAGTGACACTCTCCACTTACCGTCTTTGATCAATGTGCGTGTCAGGGAATGCCCCAGTATCAAGATTTTCTCTCAAGGAGTCATACATTCTGAGTCCTTTAAGGGAATTAGGATTTCATTCGATCCAGATGAAGATTTGGTCTTCCACCAAGATCTTAACGCCACTGTAAAAGGGATGTTCCAACGACTGGCATTTTTAGAAGCCTTGGACGAAAGGTATCCTTATGAGAATCTTAAGCAACAAAACACATGGTTGAGTTATTTGGTAACTGTGAAGCTGGACAAGTGCATTCTACCATATGCAATTCCAACTATTCTTCCTCCTTTGAAGTGTTTAAGCACATTGGAAGTGGGGGGTAGCGACCAAGTAGAGGTAATTTTTGATATGAGTAACACTGAAATACAGGAAATAGCATCACGACTGAAGGTATTGACTTTAAAAGGGCTATCAAATCTGAGAAATGTTTGGGAAATGAATAGTGAAGGAGTTCTTATCTTTTCACTTCTGCGAGAGGTCGTTGTTAGTGGTTGTAAAAACCTGCAAACTTTATTTCCTGCTTCCCTGGCAAAAATTCTTAAGCAGCTCCAGAAACTTGAAATAGATTCTTGTGATAAGTTGCTAACAATTGTTGAAAAGGAAGAAGGCACATTAGCAGACGCAACAAAAAAGTTTGTTTTCCCTTATTTAGAGAAACTGGATCTTCGTGACTTGCCACAACTGACTTACTTTTACCCAGAAACATTCACTCTGGAAAGCCCCACCTTAAATCAGTTAGCTGTGCTGTATTGTCATGAGTTGGAGTTGTTTCCAAGTGCTCATCTCCTGGAGGAGGGTGAAGGTATGAGTATATCAATCAATAGACTACCTCTCATCTCCGACCTAAAGGTTATTTCCAACATGAAGGCGTTGATGCTTGATTGGAAACAAATTTCGACATTAAGCTTATGGTTTAGGTCAGAACAATATACGGAAGACCTTGAACATTTAAACGAAGTTTCCCTGTCATTCTTTCACCGTGATGAGAATGAGAAGCCTGTGTTGCCAATTGAATTATTCCACAAGGCACCCAATTTAGAAGAACTAAATTTGGGCTACTGCAATACTCCTGAGATATTCCTTGCTCAAAACCCCAAAATCGGTGAAGATGGGATGTTTGACCACTTAAAAATATTGACACTAGATAAAGTAGGGTCTCTCCACTCTATCAAGTCAGAGGACAAGTCATTTTTAAACACAATCTCTGAGATGCTTCATGAATTAAATGTTTTCAGTTGTCCTCACTTGACAACATTAGAACATTCAGTGTCCTTCTCTTGTCTAAGAGTGGTGTACATTTACAACTGTCCCAACTTGCAGTACTTGTTCACATTTTCAGCAGCCAAAAGATTAATGAACCTTGGGGAAATCAGAGTCGAGGAATGTGAATCAGTGAAAGAAATAGTGGCTAAAGAGGGAGATGCAACTTCAGAAGCTACTGAATTTGAGCAACTGCACACCATTGCTTTAGAATCTTTACCAAGTCTAACATGTTTCTATCCAGGAAGTGACACTCTCCACTTGCCATCTTTGATCAATGTGCATATAAAAGAATGCCCCAATATGAAGACTTTCTCCCAAGGAATCATAGATGCTGAATCCTTTCAAGGAATTCAGATTTTGTTGGACTCTAATAAAGATTTACTCTTCCACCAAGATCTTAACACCACTGTAAAACGGATGTCCCAACAACAGGTAAAAACTTCATTTTAG 5895 0.3788 MKRLKEIWAKFPLRSFGKLDALIIDGCNKLEHVFPSYMVGRFQSVCNLKVTDCKSLKVIFDLKGCGCGKPDAEDITNLQNFHVEALPKLEHVWNKDPKGILNFKNLKSILVQECLHLEYIFPLSIAMDLEKLECLEVQNCGQLKEIVSRVEANNMSSISFEFPKLTTARFLKLPNLESFYGGTHEICCSALNNLSVELCHKLELFRKENTNSEIEPVFLPEKVIYNLKSMQIEPQDADWLMTYMGNYRMHKLKEFQLSRLVDTKILYFFLHRNPNLKSLLLSNCFFEQLLPPRGLGEENLGVVPKLKCLKLMNLPSLKMIGFEEDTILFQKLECLILKECPCLNNIPSSMSFTYLTNLEVSNCNKLSYLMTTSTAKSLLQLTTMKVTQCESMETIVSDQENKREIISEKLKETKPRISFKQLKAIELITLHALESFYSSFRCSFEFPSLENFVVSECGNLKSFTYNDEDKAPILQQICDRDETEEKQYYWKGDLNATIKHMYQIRAIVPDRMETYNPYTILESSYLKTLKLVNIEDGKPAIPTIVFPGLKNLEELEVSCSNVEVIFDIMNADMKGYTLPLKKLTLCKLPMLTHVWNEDHEGFLSFQNLREVHVSHCSNLETLFVMELAKRVEKLEKLEIRHCEKFLKVVEEDRATTEAAEEFSFPRLTSLDLRMLPQLTCFYPGKAIFMLESLKLDLKNAMMLCNRNFPEDMLHELVELELDFDDVSEVSNFPFEFFEKASNLEYLQIRRCRGLEELFPSQPQLCEIRMPAHLTTIVHSAVSFSNLKQLSVKYCHGLKHLFTSSTARKLVHLEEMYVVKCDSIEKILAKELNETTSEAIKFERLNTIILDSLSSLKCFYSGSDTLQLPSLIRLLVWKCTKMKIFSRGEIQAQTFLGIQVSLDPKDDLLFHQDLNTTVKMIQRQEFFKALGENIHELVADSQVNVAVGLQDKWLRNLGALKLDKCILPYAIPSCIVPNLNNLKELEVQDSDKVEVIFDMNDIEIMETESKLKRLTLNGLSKLVRVWEKNRQGVLIFQNLQEVVVNNCESLQTLFPASLAKNLKELEKLEIHYCLKLQEIVENEEDTAANITEKFVFPCLKTLVLCDLPQVTYVCPQTFSLGCPALKYLFVLHCDELELFQSAHPVGEGEGGGTSITTQPLISDLKDISYLEKFGLDWKHISALCSRFRSEQFMEGLKYLNEIHLYYGADVNKKHISPVEILQRAPNLIEISIEDGNSPEIFHAQNTIVDEDGMLGRFKTLTLENVSALQSMESKDSSWLNTICEKVQELNVVRCPHLTTLVHKVSVSCLRKVSISNCPDLQYLFPTSVAKKLLNLEEITVQECKSLKEIVAKEGDETFEAIKFERLKIIALDSLPSLICFYSGSDTLHLPSLINVRVRECPSIKIFSQGVIHSESFKGIRISFDPDEDLVFHQDLNATVKGMFQRLAFLEALDERYPYENLKQQNTWLSYLVTVKLDKCILPYAIPTILPPLKCLSTLEVGGSDQVEVIFDMSNTEIQEIASRLKVLTLKGLSNLRNVWEMNSEGVLIFSLLREVVVSGCKNLQTLFPASLAKILKQLQKLEIDSCDKLLTIVEKEEGTLADATKKFVFPYLEKLDLRDLPQLTYFYPETFTLESPTLNQLAVLYCHELELFPSAHLLEEGEGMSISINRLPLISDLKVISNMKALMLDWKQISTLSLWFRSEQYTEDLEHLNEVSLSFFHRDENEKPVLPIELFHKAPNLEELNLGYCNTPEIFLAQNPKIGEDGMFDHLKILTLDKVGSLHSIKSEDKSFLNTISEMLHELNVFSCPHLTTLEHSVSFSCLRVVYIYNCPNLQYLFTFSAAKRLMNLGEIRVEECESVKEIVAKEGDATSEATEFEQLHTIALESLPSLTCFYPGSDTLHLPSLINVHIKECPNMKTFSQGIIDAESFQGIQILLDSNKDLLFHQDLNTTVKRMSQQQVKTSF 1964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01754 1964 Gene3D Ribonuclease Inhibitor 1606 1862 IPR032675 -
Spst4g01754 1964 Coils Coil 1072 1092 - -
Spst4g01754 1964 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 953 1139 - -
Spst4g01754 1964 Gene3D Ribonuclease Inhibitor 660 835 IPR032675 -
Spst4g01754 1964 Gene3D Ribonuclease Inhibitor 1433 1596 IPR032675 -
Spst4g01754 1964 Gene3D Ribonuclease Inhibitor 509 659 IPR032675 -
Spst4g01754 1964 Gene3D Ribonuclease Inhibitor 920 1092 IPR032675 -
Spst4g01754 1964 Gene3D Ribonuclease Inhibitor 1304 1414 IPR032675 -
Spst4g01754 1964 Gene3D Ribonuclease Inhibitor 1093 1303 IPR032675 -
Spst4g01754 1964 SUPERFAMILY RNI-like 15 284 - -
Spst4g01754 1964 Gene3D Ribonuclease Inhibitor 220 478 IPR032675 -
Spst4g01754 1964 SUPERFAMILY RNI-like 580 761 - -
Spst4g01754 1964 Gene3D Ribonuclease Inhibitor 2 219 IPR032675 -
Spst4g01754 1964 SUPERFAMILY L domain-like 952 1408 - -
Spst4g01754 1964 SUPERFAMILY RNI-like 1521 1863 - -
Spst4g01754 1964 SUPERFAMILY RNI-like 264 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01754 Spst-Chr4 57602851 57610227 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01754 - - ccaj:109802431 2054.64