Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01752 ATGAAGCCTCAAGACATTTTTAACCTGATTATCAAGGTGGGGCCATATATAAAGAAGGTGCTGAAAGAACTTAGTTCATATGAAAGTAGAGTTCGAGAACTAGCCAAAGATGTTAGTAAGCTACAGAGAAAGCAAAAAAGAGTGCAAAGTAAAGCTAGAGAGGAAGAAAGAAGACATGGGAGAACTATTGACGATGAAGTCGTTCAATGGTTAAAAGGTGTGGATCAGATCATTTGTTTGTATGGGAATTTCTTGAAAGATGAAGAAAGTCAATATGCTGTGTTTTCCAATGGTTACCTTCCAAAGCCGGCGATAAGGTATCGTCTAAGCGTAATGGTAATTTATATTACAAAGAGGGTCAAGGGACTACTGGATACCAATCTTGATAACTTTTCTTATTTGTCGGGTCCACCTTCCTTTGATGCTGATTTTGACAACATTAGGTATGAAATGTATGAGTCGAGAAATCAAACTAGGGCTGAAATTATGGCTGCATTGGCAGACTCGAATGTTGGACTGATTGGAGTTTATGGGTTGAGTGGTGTGGGGAAGACTAGTTTGATCAAAGAAGTTGCCATGGAAGTAAAAGTCAACATGTTTGATGAGGTGATTATGGTGAATGTAACAAGTCGTCCCGACATACGCAGTATTCAAGGACAAATTGCTGACAACTTGGGGGTTGAGTTGAAAGAAGAGAGTGAGAGTGGAAGAGCAGCTCGCCTTAGGGAGATATTGAAGAACCCCAAGGATAAAACCCTTTTAATCCTAGATAATATGGTGGTGAAACTAGACTTGAACATGTTGGGAATTCCATCCGCGAACATTGCGAGTAGCCAGACGAATCACAAAACTTTGATGATTTCCAGCAGCGAACAACTCTTGTTAAGGCAGACGGATGGGAGACGAATTCGAAAAATTCGTGTAGAAGCATTAACAGAAGAGGAAGCAGAGAGTATGTTCAAGACCATGGCTGAAATGGGTGAAGATTCTACCTTCAAATCATTAGCAGCTCAAATTGCCAAAAAGTGTAGAGGGTTGCCCATGACGATAGTAACTACTGCAACTGCATTAAAAGGCAAGAGCCTTCCGATATGGAAGGATGCATATCGAAGGCTTGAAAGCCAAAACTTAACAGCAAGGCCTGAGTTTTCCACAAAGCTGAGTTATGAACTTCTAGAAGATAAGGAGCTCAAGCACACTTTCTTAATTTGTGCTCGTATGAATCATGATGCATTAATTACTGACTTGGTGAGATACTGCATTGCTTTGGGTTTATTTCAAGGAATTTACACAGTAAGGGAAGCTACAGATAGAGTACATGCGTTGGTTGCAAAGTTGAAAGATTTAAGTTTGTTGTCAGATAGTTTTTCAAGGGATCGTTTCACCATGCAAGATGTTGTCCGTGATGCAGCTTTGTCAATAGCTTCCCAGCAGATGAATGCCTTTGCATTGACAAAGGGTAAACTAGATGAATGGCCTGACATAGACAAGCTTAAAAGGTATACTGCTATTTCCTTTGATCATTGTGATTTGACTGACCTCATGAAGGAGTTTTCTAAACCCATAAACTGTCCTAGACTTAGAGTTTTCCATCTTGACAATAAGGATCCACTTCTGCATATACCAGATAACTTTTTTAACGCAATGAAAGAACTCCGATTGTTGACATTGATTGGCCTTCATCTATCATCCTTATCATCAATTAAATGCTTAAAAAAACTCAGAATGCTTTGTTTGGAGCGATGCAAGTTAGGCGATTTATCTGCAATTGGAGAGTTGGAGAAATTAAGAGTTCTTAGTTTATCAGGATCTGATTATGATAAATTGCCTGCTGAATTTAGCCAGTTAACTAAGCTACAAATTTTGGACATGAGTGATAGTTTTAAACTTGAAAATATTCCCGCTGGTGTATTGTCTAGTCTGACTAGTTTGGAAGAGTTGTATGCGGGAAGCAGCCATATATGGAAAGGACAGGGAAACGCTAATCTTTCTGAGCTTAGACAACTGAATCAATTAACAACACTAGATATACAGATCCCAAAAATTACCCATTTTCCAGAGAATTTGTTCTTTGACAGGTTGGATAGTTACAAGATCGTCGTTAGAGAGTTCAACGAATATCCAGAGTGGGATTTCAAGGTGCTAGAGATGTGTGAAGCATCAAGATATTTAGCACTTCAACCAGAAAACGGCTTCGACATTCATCACTGGAAGGGTATCAAAATACTGTTTGAAAGAGTTGAAAATTTGTTGCTGGGACAGCTCAATGACGTTGATGATATTTTCTCTGAATTGAATTATGAAGGATTTCCCTATCTAAAATATTTGTCCATTGCAAGTAACTCGAAAGTTCAGTCCATCATCAATTCAAAGAACCAAAACCTTCCTGAGAAAGCATTTCCCGAATTAGAGTCATTATTTCTCTATGAAGTCAACAACATGCAGCATATTTTCCAGAGTAAATTTACACCTGATTCCTTCTGCAATCTGAAAATCATTAAGATCAAGAGGTGTGGTCAATTAAAGAATGTCTTCTTCTCTTCTATGATACAACATCTCTCTGCGCTTGAAACAATGGAAGTATCTGACTGTAAGTCATTGAAGGAGATTGTTACCATGAAAAGGGATAGCAATAGATCTACAGATGATATCAAGTTTCCTGGATTGCGCTCTTTGACACTACAATATTTGTCTGAATTAAATGGATTCTACACCGATGATGCATCAACAGGAAAGCAAGCTCTAAATACAAAGCCCGGTGAACTCTTTGATGAAAAGTTGGATGTGAATGATTGCATGAATTTGCGATACCTACTGTCCCTTTCGATGGCCAAAATTCTGATGAATCTTCAAAGCCTTTACGTAAGTCAATGTGGGATGATGGAGAGCATATTCAAAATGGAAGTTAGTTTGACCGATATAGAGAAAGCCTTCTACAAAATCCTACATGTGATATATGCAAGTATTTCATGTCCTACACTTTTATGTGGAAATTCTATAACAGTGTATGACCTTCAAGTACCATGGTCATAG 3033 0.3841 MKPQDIFNLIIKVGPYIKKVLKELSSYESRVRELAKDVSKLQRKQKRVQSKAREEERRHGRTIDDEVVQWLKGVDQIICLYGNFLKDEESQYAVFSNGYLPKPAIRYRLSVMVIYITKRVKGLLDTNLDNFSYLSGPPSFDADFDNIRYEMYESRNQTRAEIMAALADSNVGLIGVYGLSGVGKTSLIKEVAMEVKVNMFDEVIMVNVTSRPDIRSIQGQIADNLGVELKEESESGRAARLREILKNPKDKTLLILDNMVVKLDLNMLGIPSANIASSQTNHKTLMISSSEQLLLRQTDGRRIRKIRVEALTEEEAESMFKTMAEMGEDSTFKSLAAQIAKKCRGLPMTIVTTATALKGKSLPIWKDAYRRLESQNLTARPEFSTKLSYELLEDKELKHTFLICARMNHDALITDLVRYCIALGLFQGIYTVREATDRVHALVAKLKDLSLLSDSFSRDRFTMQDVVRDAALSIASQQMNAFALTKGKLDEWPDIDKLKRYTAISFDHCDLTDLMKEFSKPINCPRLRVFHLDNKDPLLHIPDNFFNAMKELRLLTLIGLHLSSLSSIKCLKKLRMLCLERCKLGDLSAIGELEKLRVLSLSGSDYDKLPAEFSQLTKLQILDMSDSFKLENIPAGVLSSLTSLEELYAGSSHIWKGQGNANLSELRQLNQLTTLDIQIPKITHFPENLFFDRLDSYKIVVREFNEYPEWDFKVLEMCEASRYLALQPENGFDIHHWKGIKILFERVENLLLGQLNDVDDIFSELNYEGFPYLKYLSIASNSKVQSIINSKNQNLPEKAFPELESLFLYEVNNMQHIFQSKFTPDSFCNLKIIKIKRCGQLKNVFFSSMIQHLSALETMEVSDCKSLKEIVTMKRDSNRSTDDIKFPGLRSLTLQYLSELNGFYTDDASTGKQALNTKPGELFDEKLDVNDCMNLRYLLSLSMAKILMNLQSLYVSQCGMMESIFKMEVSLTDIEKAFYKILHVIYASISCPTLLCGNSITVYDLQVPWS 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01752 1010 Pfam NB-ARC domain 160 380 IPR002182 GO:0043531
Spst4g01752 1010 SUPERFAMILY L domain-like 490 963 - -
Spst4g01752 1010 Coils Coil 17 58 - -
Spst4g01752 1010 Gene3D - 310 393 IPR042197 -
Spst4g01752 1010 Gene3D Ribonuclease Inhibitor 524 974 IPR032675 -
Spst4g01752 1010 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 404 IPR027417 -
Spst4g01752 1010 Gene3D - 147 302 IPR027417 -
Spst4g01752 1010 PRINTS Disease resistance protein signature 246 260 - -
Spst4g01752 1010 PRINTS Disease resistance protein signature 343 357 - -
Spst4g01752 1010 PRINTS Disease resistance protein signature 173 188 - -
Spst4g01752 1010 PRINTS Disease resistance protein signature 851 867 - -
Spst4g01752 1010 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 32 903 - -
Spst4g01752 1010 SMART AAA_5 170 382 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01752 Spst-Chr4 57558410 57561890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01752 549 707 Receptor kinase-like Gene Family AT3G05360 32.530 1.03e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01752 - - ccaj:109802431 1224.54