Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01742 ATGTCAAACGCAGAGCAAGCACGTACTTTATTTGGAATTTCTCTCTCTCATAGACCCAAATGGCAACAGTTCTTCATTTGCTCTTCAGGCTTCTTCTTTGGATATCTCGTTAATGGCATATGTGAGGAATATGTCTATAACAGGCTTCATTTTAGCTATGGCTGGTACTTCACATTTGTTCAAGGATTTGTTTACTTGTTTCTGATTTATCTCCAAGGCTTCACAAGCAAGCAAATGGTGAACCCATGGAGAACTTATGTGAAGCTTTCTGCTGTGCTTATGGGGTCCCATGGCCTAACAAAGGGATCTTTGGCTTTTCTGAACTACCCTGCACAAATCATGTTCAAATCAACAAAGGCAAGTGACAAAAAGGCACAAGGGAAAAAAATGATGGTGATGGGTTCCTTCATACCAGGTCTAAGAAGGAAATATCCATTTCATGAATATGTATCTGCTGTTCTTCTGGTGATTGGCTTGATCCTGTTCACACTAGCAGATGCACAGACATCACCCAATTTCAGTGTCATTGGTGTTGTTATGATATCTGGTGCTTTGATCATGGACTCCTTTTTGGGAAATATGCAAGAAGCAATCTTTACAGTGAACCCTCAGACCACACAGATGGAGATGCTTTTCTGCTCAACTGTGGTGGGTTTGCCTTTCTTAATCCCTCCCATGATTTTTACAGGAGAGTTATTCAAAGCATGGACTTCATGTTCACAGCATCTTTATGTGTATGGAGTGTTAGTGTTTGAAGCAATGGCCACATTCATAGGCCAAGTTTCTGTGCTGTCACTCATTGCCATTTTTGGGGCTGCCACTACAGCCATGATAACAACTGCAAGAAAGGCAGTGACATTGCTACTATCATTCCTCATATTTACCAAACCACTGACAGAACAACATGCAACTGGACTTCTACTCATAGCTATGGGGATTTCGTTGAAGATATTTCTTGATGACAAATCTAACAAAAAGAGCACAAATTCTTCTCCCATTGTCAATATTCCAAAACCTCCTGAGGATAAACAACTTACTGCACAATTAGATTATGCAGGAGAAGATGAAGAAAGGAGGTCATTGGTCTAA 1089 0.405 MSNAEQARTLFGISLSHRPKWQQFFICSSGFFFGYLVNGICEEYVYNRLHFSYGWYFTFVQGFVYLFLIYLQGFTSKQMVNPWRTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKASDKKAQGKKMMVMGSFIPGLRRKYPFHEYVSAVLLVIGLILFTLADAQTSPNFSVIGVVMISGALIMDSFLGNMQEAIFTVNPQTTQMEMLFCSTVVGLPFLIPPMIFTGELFKAWTSCSQHLYVYGVLVFEAMATFIGQVSVLSLIAIFGAATTAMITTARKAVTLLLSFLIFTKPLTEQHATGLLLIAMGISLKIFLDDKSNKKSTNSSPIVNIPKPPEDKQLTAQLDYAGEDEERRSLV 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01742 362 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 12 319 IPR013657 GO:0055085
Spst4g01742 362 Pfam UAA transporter family 23 317 IPR013657 GO:0055085
Spst4g01742 362 MobiDBLite consensus disorder prediction 348 362 - -
Spst4g01742 362 MobiDBLite consensus disorder prediction 323 362 - -
Spst4g01742 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 216 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01742 Spst-Chr4 57410844 57413176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01742 103 344 Organic Solute Cotransporters AT5G59740 25.397 6.72e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01742 K15277 - gmx:100791781 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01742 4 57410844 57413176 Spst4g01742 4 57410844 57413176 ECH