Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01730 ATGAGTATTACCTTGTGGCTCTTTCTGCTACCCTTTTGCCTCTTAAACTTGAGCACCAACATAATTTTTGTAACTAGTCATTGTCTTGGTCATCAACAATCTTATTTACTCAATTTGAGGAATAACCTCATATTCAATCCTACCAAGTCCAAAAAATTGATTTACTGGAATCAGAGTGCTGATTGTTGTGAATGGAGTGGAGTGACATGTAACAAAGGCCATGTTATTGCTCTTGACTTGAGCCAAGAATCCATCTCTAGAGGTATTGATCATTTAAGTAGTCTCTTCAAGTTACAATATTTACAAAGTTTGAATTTGGCCCTTAATGATTTTCATTCTAAGGTTTCTCCAGAGTTTCGAAAGCTAAAGAATTTGAGGCATTTGAATTTGTCAAATGCTGGCTTTGAGGGGCAAATTCCAATTGAGATCTCGTACCTCACGAAGTTAGTAACTCTTGATTTGTCTAGCACAGTTACTTCAAAACATGTACTAAAACTTGAGCAACCAAATATTGCAATGCTTGTGCAGAACTTGACAAAAATCAAAGAGTTACATTTGGATGGCATTGCAATATCAGCCAAAGGAAAGGTGTGGAGTCATGCTTTATCTTCACTTACCAACATGCAAGTTTTAAGCATGTCATCTTGTAATCTCTCTGGTCCTTTTGATTCTTCATTAGGAAAGCTACAATCTCTCTTAATACTTCGATTGGACCAGAACAATTTAGCATGTCCAGTTCCAGAGTCCTTGGGGAGTTTGTTTAATTTGACCACCTTGCAACTCAGTGGTTGTGGTTTGAGTGGAGTCTTTCCAAAAAATATCTTCCAAATACCATCACTACAGGTGCTTGATGTGTCTGATAATCCAGGTCTTCATGGTTCTCTACCAAACTTCCCAAGTCAAGGCTCTCTCTACAACTTCAACCTTAGCCACACAAATTTTTTTGGACCTTTGCCGGAGTCTATTGACAATTTGAAGCAATTGTCTAAATTAGATTTATCAAATTGCCAGTTCAGAGGGACACTTCCTTATTCAATGTCAAATCTCACACAACTTGTTCATTTGGACTTGTCATACAATAACTTCACTGGTCCTATCCCATCTTTTAATAGGTCCAAGGCCCTGGTAGTTTTATCATTTAATCATAATCATTTTATGGGTACAATTCCATCTACCCATTTTGAGGGCCTTATAAATCTCATGAGCATTGATTTAGGAGATAACTCCTTTGATGGAAGGGTCTCGTCATCTTTATTAAGACTTCAATCTCTTCAACATCTCATGCTCTATTACAACAAATTTGATGGTGTGTTGGACGAATTTCCAAATGCTTCTTTGTCATTATTAGAGATGCTTGATTTGAGTGGAAACAAATTTGAAGGACCTATTCCTATGTCTATCTTTCAACTCAAAAGACTTCGTTTGCTTCAACTTTCTAAAAACAAGTTCAATGGCACTATACAACTTGACATGATTGGGAGGCTGCAAAATTTGTCTTCACTTGATCTTGCACACAATAACTTGTTAGTTGATGCAAGCACTGCAGATGCATCATCCTTTCCCAGTCTGAAAACTCTTTGGTTGGCTTCATGCAATTTGAGAGCATTCCCAAACTTTTTGAGAAATAAATCTTCATTACTCTACCTAGACTTGTCTGACAATCATATTGAAGGAACTATACCCAGCTGGATTTGGAAATTTGACAATATGATTATTTTGAATATGTCTTACAACTTCTTGACAGATTTTGAAGGGCCTTTCCAAAACCTTAGTTCAAATTTGTTGAAACTTGATCTTCACTCAAACCGTCTCCAAGGGCTTGCTCCTACCTTTTTGAAAAATGCCATTTATTTGGACTACTCAAGCAATAGATTTAGCTCTATTAACTTTGTTGACATTGGTAGTCACATTCCTTTCTTATACTTTCTCTCCCTTTCAAACAACAGTTTTCATGGAATAATCCATGAATCCTTTTGTAACGTTTCTGATCTTCGAGCACTTGATCTTTCCCACAACAGATTCACTGGCCTCATTCCAATGTGTTTGACAAGAAGAAGTAGCACTCTCAGGCTACTAAATCTTGGCGGAAATAAGCTCAGTGGCTATATTTCAGATACATTCTCAACTTCATGTTCTCTAAGGTTTTTGGATCTTAGTGGGAATCTTGTAAGGGGAAACATCCCGAAATCTCTGGCTAATTGTAAGAAACTACAAGTTCTAAACCTTGGAAACAATAAACTAATTGACAGATTTCCATGCTTCTTGAAGAGCATTTCCTCCCTCAAAGTCATGATTTTAAGATCAAACAATTTGCATGGACGTATTGGATGTTCTAATAACATTGGCGATTGGAAGACACTTCAAATTGTTGATTTAGCCTATAACAATTTCAGTGGTACATTACCAACATCACTCTTACTGAGTTGGAAAGCTTTGATGCTTGATGAAGATAAAGGTGAAAGATTTGGTCATTTATATTTTAATCTCTATGATGACTTTAATCCTGTGAATTTCATAACTGCAATTGTAGATATGAACAGTGAGCTACAATTGAAGCTAGCCAAAATTATAGCATCAGAGCCACCCTTTATAATAGACCACATAGTCTCTCATATCTTTGAGGAGGGTGTTGGTGTAAGAACTTATGAGGATTCAGTTACAATAGTCAACAAAGGTAGACAATTAAATTTGGTTAAAATCCTCATTGCCTTCACTTCCTTGGATTTCTCATCCAACAATTTTGAAGGGCCAATACCAAAAGAGCTTATGAATCTCATAGCACTACATGCTCTTAACTTGTCACAAAATGCTTTCTCAGGTAGCATCCCTTCTTCCTTGGGCAATCTAAAGCACCTTGAGTCCTTAGACTTATCAAACAACTCTTTAGGAGGAGAGATTCCAATAGAGCTTGCAAAGTTATCATTTCTTGCTGTCATGAATCTCTCTTATAACCATTTGGTGGGAAAAATACCCACTGGAACACAAATTCAAACATTTGAGGCTGATTCATTTGTAGGCAATGAAGGGTTATGTGGACCTCCACTATCCCAAAAATGTGATGGTGAAGGACAAAAAATGTTTCCATCACCACCATCTGAAACACTTGATTATGATGCAAAGGGTTCAATTGAATGA 3135 0.3678 MSITLWLFLLPFCLLNLSTNIIFVTSHCLGHQQSYLLNLRNNLIFNPTKSKKLIYWNQSADCCEWSGVTCNKGHVIALDLSQESISRGIDHLSSLFKLQYLQSLNLALNDFHSKVSPEFRKLKNLRHLNLSNAGFEGQIPIEISYLTKLVTLDLSSTVTSKHVLKLEQPNIAMLVQNLTKIKELHLDGIAISAKGKVWSHALSSLTNMQVLSMSSCNLSGPFDSSLGKLQSLLILRLDQNNLACPVPESLGSLFNLTTLQLSGCGLSGVFPKNIFQIPSLQVLDVSDNPGLHGSLPNFPSQGSLYNFNLSHTNFFGPLPESIDNLKQLSKLDLSNCQFRGTLPYSMSNLTQLVHLDLSYNNFTGPIPSFNRSKALVVLSFNHNHFMGTIPSTHFEGLINLMSIDLGDNSFDGRVSSSLLRLQSLQHLMLYYNKFDGVLDEFPNASLSLLEMLDLSGNKFEGPIPMSIFQLKRLRLLQLSKNKFNGTIQLDMIGRLQNLSSLDLAHNNLLVDASTADASSFPSLKTLWLASCNLRAFPNFLRNKSSLLYLDLSDNHIEGTIPSWIWKFDNMIILNMSYNFLTDFEGPFQNLSSNLLKLDLHSNRLQGLAPTFLKNAIYLDYSSNRFSSINFVDIGSHIPFLYFLSLSNNSFHGIIHESFCNVSDLRALDLSHNRFTGLIPMCLTRRSSTLRLLNLGGNKLSGYISDTFSTSCSLRFLDLSGNLVRGNIPKSLANCKKLQVLNLGNNKLIDRFPCFLKSISSLKVMILRSNNLHGRIGCSNNIGDWKTLQIVDLAYNNFSGTLPTSLLLSWKALMLDEDKGERFGHLYFNLYDDFNPVNFITAIVDMNSELQLKLAKIIASEPPFIIDHIVSHIFEEGVGVRTYEDSVTIVNKGRQLNLVKILIAFTSLDFSSNNFEGPIPKELMNLIALHALNLSQNAFSGSIPSSLGNLKHLESLDLSNNSLGGEIPIELAKLSFLAVMNLSYNHLVGKIPTGTQIQTFEADSFVGNEGLCGPPLSQKCDGEGQKMFPSPPSETLDYDAKGSIE 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01730 1044 SMART LRR_typ_2 592 614 IPR003591 -
Spst4g01730 1044 SMART LRR_typ_2 949 973 IPR003591 -
Spst4g01730 1044 SMART LRR_typ_2 637 660 IPR003591 -
Spst4g01730 1044 SMART LRR_typ_2 661 684 IPR003591 -
Spst4g01730 1044 SMART LRR_typ_2 495 518 IPR003591 -
Spst4g01730 1044 SMART LRR_typ_2 229 253 IPR003591 -
Spst4g01730 1044 SMART LRR_typ_2 520 543 IPR003591 -
Spst4g01730 1044 SMART LRR_typ_2 122 146 IPR003591 -
Spst4g01730 1044 SMART LRR_typ_2 446 470 IPR003591 -
Spst4g01730 1044 SMART LRR_typ_2 349 382 IPR003591 -
Spst4g01730 1044 SMART LRR_typ_2 421 443 IPR003591 -
Spst4g01730 1044 MobiDBLite consensus disorder prediction 1015 1044 - -
Spst4g01730 1044 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Spst4g01730 1044 FunFam Tyrosine-sulfated glycopeptide receptor 1 876 1024 - -
Spst4g01730 1044 SUPERFAMILY L domain-like 60 189 - -
Spst4g01730 1044 Pfam Leucine Rich Repeat 664 682 IPR001611 GO:0005515
Spst4g01730 1044 Gene3D Ribonuclease Inhibitor 614 1027 IPR032675 -
Spst4g01730 1044 Gene3D Ribonuclease Inhibitor 301 371 IPR032675 -
Spst4g01730 1044 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 297 389 - -
Spst4g01730 1044 SUPERFAMILY RNI-like 198 509 - -
Spst4g01730 1044 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 658 751 - -
Spst4g01730 1044 SUPERFAMILY L domain-like 612 1004 - -
Spst4g01730 1044 PRINTS Leucine-rich repeat signature 664 677 - -
Spst4g01730 1044 PRINTS Leucine-rich repeat signature 949 962 - -
Spst4g01730 1044 SUPERFAMILY L domain-like 489 629 - -
Spst4g01730 1044 Gene3D Ribonuclease Inhibitor 196 300 IPR032675 -
Spst4g01730 1044 Gene3D Ribonuclease Inhibitor 372 613 IPR032675 -
Spst4g01730 1044 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 414 1020 IPR046956 -
Spst4g01730 1044 Pfam Leucine Rich repeat 950 965 IPR001611 GO:0005515
Spst4g01730 1044 Pfam Leucine Rich repeat 543 558 IPR001611 GO:0005515
Spst4g01730 1044 Gene3D Ribonuclease Inhibitor 29 195 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01730 Spst-Chr4 57319379 57322513 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01730 6 1019 Receptor kinase-like Gene Family AT1G47890 33.754 1.04e-134 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01730 - - gmx:100805833 1744.94