Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01727 ATGGCGGACGCTGACCTCACCTCTCCGCTCCTACCCTCCGACCACATCGTCCTCACCGTGCACTCCTCCGCTGCTCCCTCTGCCGCTGACAACCCCTTCCGCGCCCTAGGATGCGATGATGAGCTCGCTGTGCCGCCTCCTGGAACCATCGACCCCTTCCGCAACGGCACGCCGGCGATTGAGGGGCTCTACGAGTGGGTAAAGATGCTGCTGTGTCTGCCGGTGGCGGCGCTGCGGCTCGTGATCTTCGGGCTGTGCCTCGCGGTGGGGTACGTGGCGACGAAGGTAGCGCTGGAAGGGTGGAAGGCCAAGGAGAATCCTATGCCGAAGTGGAGATGTAGGGTTATGTGGATCACGCGAATAGGGGTTTTGGAAGGAAGTTGGTTTCTTTTGGAAGGAAGTAGATGCAAGGTAAAACAATGGTTTAGGGTACATGTAGTGAGCGTGAAAATCATAACTGGGGTTGATACGTTTGTTAGTGAACTTCTGGGTTTTATCTTGGGTTGGGCGGTGGGAAATATGCCAGAGAAATGCAGGATAGAATTGGCTTTTTGTGCAAATAGTTTTGAGTTTGCCATCTATCAGTGGATAAAACGGAAAGGAAAACCTGCACCAAGGGAAATTGCTCCAATAATTGTATCCAATCATGTATCATACATTGAGCCTATCTTCTATTTTTACGAATTATTTCCCACTATTGTGGCATCTGAGTCTCATGACTCCATACCTTTTGTTGGCACAATTATAAGAGCAATGCAGGTCATATATGTTAACAGATTCGTACCATCATCGAGGAAGCAGGCTATCAGGGAAATAAAGAGAAGGGCCTCTTGTGATAAATTTCCTCGAGTACTATTATTTCCTGAGGGAACAACAACTAATGGGAGGAACCTTATCTCCTTCCAACTTGGTGCATTTATCCCTGGATACCCAATCCAGCCTGTGATTGTACGCTATCCTCATGTGCACTTTGACCAATCCTGGGGTAATGTTTCTTTGGGGAAGCTTATGTTCAGGATGTTCACTCAATTTCACAACTTTTTTGAGATAGAATATCTTCCCGTTGTTTATCCCCTGGATGATAAGGAAACTGCTGTACATTTTAGGGAGAGGACTAGCCGTGCCCTTGCAACTGCAATGAATGCTGTCCAGACAGGACATTCTTATGGAGACATAATGCTTCATATGAAAGCACAAGAAGCAAAACAGGAGAACCCCTCAAGTTATATGGTTGAAATGACAAAGTTGGAAGCATTATTTCATGTCAGCAGCATGGAAGTTGTGGGCTTTCTGGATAAATTCTTGGCCATGAATCCTGATCCCAGTGGTCGTGTCCAATATCATGACTTCTTGAGGGTTTTAAGACTTAAGGCTTGCCCGCTATCTGCAAAGATATTTTCATTCATTGATGTGGAGAAGTGTGGAACAATTACATTCAGACAGTTCTTGTATGGATCTGCCCATGTCATGTCGCAACCAGGGTTCCATCAAGCCTGTGAAGAAGCCTTTTCTGGGTGTGGTGGTGCAGTAAAGCCCTATATTGTTGAACAAGAGTTACGAGATTTCATCCAACCTGTAATCTTCAGCTGGAATGAGGTTGAGGTCCATGAGCTTTTTATGTTATTTGATAACGATAATGATGGAAGAATTGACAAGAATGACTTTGTTTCAATCCTTAGAAAAAATCCTCTTCTCGTAGCATTTTTTACACCTCAACCAAAGCAAAAGGAATTTGAAGGTAATAGAGTGATAGAGATAGTGTGA 1764 0.4524 MADADLTSPLLPSDHIVLTVHSSAAPSAADNPFRALGCDDELAVPPPGTIDPFRNGTPAIEGLYEWVKMLLCLPVAALRLVIFGLCLAVGYVATKVALEGWKAKENPMPKWRCRVMWITRIGVLEGSWFLLEGSRCKVKQWFRVHVVSVKIITGVDTFVSELLGFILGWAVGNMPEKCRIELAFCANSFEFAIYQWIKRKGKPAPREIAPIIVSNHVSYIEPIFYFYELFPTIVASESHDSIPFVGTIIRAMQVIYVNRFVPSSRKQAIREIKRRASCDKFPRVLLFPEGTTTNGRNLISFQLGAFIPGYPIQPVIVRYPHVHFDQSWGNVSLGKLMFRMFTQFHNFFEIEYLPVVYPLDDKETAVHFRERTSRALATAMNAVQTGHSYGDIMLHMKAQEAKQENPSSYMVEMTKLEALFHVSSMEVVGFLDKFLAMNPDPSGRVQYHDFLRVLRLKACPLSAKIFSFIDVEKCGTITFRQFLYGSAHVMSQPGFHQACEEAFSGCGGAVKPYIVEQELRDFIQPVIFSWNEVEVHELFMLFDNDNDGRIDKNDFVSILRKNPLLVAFFTPQPKQKEFEGNRVIEIV 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01727 587 CDD LPLAT_LPCAT1-like 184 393 IPR045252 GO:0008374
Spst4g01727 587 ProSiteProfiles EF-hand calcium-binding domain profile. 530 565 IPR002048 GO:0005509
Spst4g01727 587 Coils Coil 584 587 - -
Spst4g01727 587 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 45 407 - -
Spst4g01727 587 Pfam Acyltransferase 207 314 IPR002123 GO:0016746
Spst4g01727 587 Gene3D - 402 585 - -
Spst4g01727 587 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 203 387 - -
Spst4g01727 587 SMART plsc_2 210 320 IPR002123 GO:0016746
Spst4g01727 587 SUPERFAMILY EF-hand 414 571 IPR011992 -
Spst4g01727 587 ProSitePatterns EF-hand calcium-binding domain. 543 555 IPR018247 -
Spst4g01727 587 SMART efh_1 534 562 IPR002048 GO:0005509
Spst4g01727 587 Pfam EF-hand domain 535 561 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01727 Spst-Chr4 57270469 57280863 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01727 151 383 Acyl Lipid Metabolism Gene Families AT1G80950 31.687 7.83e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01727 K13510 - gmx:100818109 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01727 4 57270469 57280863 Spst4g01727 4 57270469 57280863 ECH