Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01719 ATGGCTGAGATGTGCAGTGCAATAGATCTGGACTATAATGAAACTGGTAGTAAAAATAAATATTTCGATAGTTTGACAGTACCACTTTCAACGAGCTCAATGGCAACGGGAGACCAACACAACCACAAAGATAACAAGGAGCAGCTTCGACCACTCCTTGTGTTTGGTCCTCCAACAATCTTCCCAGTTTTTGAAGCTCAAAACTTTCACAACTACCGTTTCCTTAAAGCTTTCTCCTCACAAGTCCCTCTCCGTCAGTTCCTCACCGAGCAAAAAGTTGACCCTTCATCCATTCAAGCTATATTTTGCAACCCTGTACAGAAGGTCTCAGCAGATGTCATCCGGCTTCTACCCTCACTCCGCATCATTGTGACCAGCAGCACTGGAACCGATCACATAGACTTGGTTGAGTGCAGCCGCCATGGTATTCAGGTTGTCTCTACTGCAGGAGATCATGCCGGGGATGTTGCTGATATGGCTGTGGGGTTGTTGCTTGATGTAATGTGGAAAATTTCTGCCGCTGATCTACATGTTCGGAAATGGGGTCCTTCTATGCCCTTGAATCTTTCTTTTGGTTCCAAGGTACTGCTCATTCTTCTGCTTGTTCAATCTATGGGTGCTCTTTACATAGCATCATTCGGCTTTGTGTTTCAGCTGAAAGGAAAGAGAGTAGGGATTGTTGGATTGGGAAAAATTGGCACAGCAGTTGCTAAAAGGCTTGAGGCCTTTGACTGCAGAATTATGTACAATTCAAGAAACGAGAAGCCATTTGTTTCTTACCCCTTTTATTCTAATGTTGTTGAGCTTGCTGGTAATAGTGACGTCCTTGTGCTTTGTTGCTCATTAAATGAACAAACGCGGCACATAATCAACAGGGAAGTGATGTTGGGTTTGGGGAAAGATGGAGTTATTATTAATGTTGGCCGTGGAGCTCTAATTGATGAAAAGGAATTGGTGCGGTGTTTGATGGAAGCGGAGATATGGGGTGCTGGCTTGGATGTGTTTGAGAATGAGCCTAAAGTTCCCAACGAGCTCTTTGCATTGGATAATGTCGTCCTCTCCCCACATGCTTCTTCATTTACTTCAGATAGTTTCACTGAATCATGCAAACGTTCAGCAGAAGCTCTAGAAGTGTTCTTTTCAAGTAATATATCGAGTACTCCACTCTTGGATGACTAA 1179 0.4368 MAEMCSAIDLDYNETGSKNKYFDSLTVPLSTSSMATGDQHNHKDNKEQLRPLLVFGPPTIFPVFEAQNFHNYRFLKAFSSQVPLRQFLTEQKVDPSSIQAIFCNPVQKVSADVIRLLPSLRIIVTSSTGTDHIDLVECSRHGIQVVSTAGDHAGDVADMAVGLLLDVMWKISAADLHVRKWGPSMPLNLSFGSKVLLILLLVQSMGALYIASFGFVFQLKGKRVGIVGLGKIGTAVAKRLEAFDCRIMYNSRNEKPFVSYPFYSNVVELAGNSDVLVLCCSLNEQTRHIINREVMLGLGKDGVIINVGRGALIDEKELVRCLMEAEIWGAGLDVFENEPKVPNELFALDNVVLSPHASSFTSDSFTESCKRSAEALEVFFSSNISSTPLLDD 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01719 392 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 97 180 - -
Spst4g01719 392 Gene3D - 153 361 - -
Spst4g01719 392 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 58 382 - -
Spst4g01719 392 CDD HPPR 51 381 - -
Spst4g01719 392 FunFam Putative 2-hydroxyacid dehydrogenase 153 361 - -
Spst4g01719 392 Gene3D - 85 381 - -
Spst4g01719 392 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 217 357 IPR006140 GO:0051287
Spst4g01719 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 359 IPR036291 -
Spst4g01719 392 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 84 374 IPR006139 GO:0016616|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01719 Spst-Chr4 57120863 57123119 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01719 K15919 - gmx:100812243 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01719 4 57120863 57123119 Spst4g01719 4 57120863 57123119 ECH