Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01718 ATGGCAGAAGAATCAAACAACGGCACCAATCACATGCAAGATCTTCCCAAAGTGCTGCTTCTGGGCCCGGGTCCGCCATTTTGCTTCGAATCCCTTCAACTTCTCTACTCTCACAAGTTCCATTTTCTCAACCCTCACCTCTCAGATCTCTCGCTGCAACACTTCCTTGACCACCACCACCCTCCCTCCATTCCCGCCATTCTCTGCAGCCCCAAACACTCCGTTACCGCCGACGTCCTCCGCCTCCTCCCGTCGCTCCGTCTGGTCCTCACCACCAGCGCCGGAACGAATCACATCGACCTCCGCGAGTGCCGTCGCCGGGGAATCCAGGTAGCCAACTCCGGAGCTCTGTTCTCGGAGGATGTGGCGGACATGGCTGTGGCTCTTCTTATAGACGGATTGAGGAAAATCTCGGCGGCCGATCGATGGTTAAGGACGCAGAATCGCCAGAATACACCTTGGGATTTATTCCCTCTGGGCTTCAAGTTATCAGGGAAGCGAGTTGGGATTGTTGGATTGGGAAGCATTGGCATGGAAGTGGCCAAGAGGCTGGAGCCTTTTGGTTGCATTATCTCATACAACTCTAAGCATAGAAAAGGTAGAGTTTCGTATCCTTTCTGTTCTACTGTACTTGAGCTTGCAGCTACTTGTGATGTTCTTGTAGTCTGTTGTGCCCTAAATGAGGAAACAAAGCACATAATTAACAGGGAAGTCATTTTGGCATTGGGAAAAGGAGGGTTTATTGTCAATGTTGGAAGAGGGGAGCTTATTGATGAAAAGGAATTGGTTAAGTGTTTGATGGAAGGGGAATTAGGAGGTGCTGGTTTTGATGTGTTTGAGAACGAGCCTCGTATTCCCCAAGAGCTCTTTAAAATGGATAATGTGGTTTTGTCTCCGCATGTTGGGCCTTTGACTGAATCTTACATGAATATTTGTGCACTTATGGTAGGGAATTTAGAAGCCTTCTTCTTGAATAAGCCCCTACTTACTCCACTTATCTTGTCTGAATAA 1011 0.4847 MAEESNNGTNHMQDLPKVLLLGPGPPFCFESLQLLYSHKFHFLNPHLSDLSLQHFLDHHHPPSIPAILCSPKHSVTADVLRLLPSLRLVLTTSAGTNHIDLRECRRRGIQVANSGALFSEDVADMAVALLIDGLRKISAADRWLRTQNRQNTPWDLFPLGFKLSGKRVGIVGLGSIGMEVAKRLEPFGCIISYNSKHRKGRVSYPFCSTVLELAATCDVLVVCCALNEETKHIINREVILALGKGGFIVNVGRGELIDEKELVKCLMEGELGGAGFDVFENEPRIPQELFKMDNVVLSPHVGPLTESYMNICALMVGNLEAFFLNKPLLTPLILSE 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01718 336 Gene3D - 53 327 - -
Spst4g01718 336 CDD HPPR 16 323 - -
Spst4g01718 336 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 15 328 - -
Spst4g01718 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 119 302 IPR036291 -
Spst4g01718 336 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 127 302 IPR006140 GO:0051287
Spst4g01718 336 FunFam Putative 2-hydroxyacid dehydrogenase 119 305 - -
Spst4g01718 336 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 65 327 IPR006139 GO:0016616|GO:0051287
Spst4g01718 336 Gene3D - 119 305 - -
Spst4g01718 336 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 16 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01718 Spst-Chr4 57114361 57117366 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01718 K15919 - gmx:100776772 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01718 4 57114361 57117366 Spst4g01718 4 57114361 57117366 ECH