Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01717 ATGGCAGAAGAAGCTAACAATTGCAGCAATCACTTGCAAGATCTTCCCAAAGTGCTGGTTCTGGGTCCCCCATTGTCCTTCCAATTCCTTCAACCTCTCTACTCTCACAAGTTCAATTTTCTCAAACCTCACCTCTCAGATTTCTCCCTGCAACACTTTATTAACCACCACCATCCTCCATCCATCCTCGCTATTCTCTGCGGTACCAAATTCTCCGTCACCGCCGATGTCCTCCGCTTACTCCCGTCGCTTCGCCTTGTCCTCACTGCCAGCGCCGGAACAGATCACATCGACCTCAGCGATTGCCGGCGTTGCGGGATCCAGGTAACTGGCGTCGGAGCTCTGTTCTCGGAAGATGTGGCGGACATGGCTGTGGCTCTGCTCGTTGACGGAATGAGGAAAATCTCGGAGGCGGATCGATGGTTAAGGAAGAATAATCGCGACAATACGCCTTGGGATTTATTCCCATTGGGCTCCAAGTTATCAGGGAAGCGCGTTGGGATTGTTGGATTGGGAAGCATTGGCATGGAAGTGGTCAAGAGACTCGAGTCTTTTGGTTGCATTATATCATACAACTCTAAGCATAAGAAAGCTACAGTTTCATATCCTTTCTATGACAGTGTTGTTGAACTTGCAACTAATTGCGATGTTCTTGTGCTGTGTTGTGCACTAAATGAGCAAACAAAGCACATAATTAACAGGGAAGTAATTTTGGCATTAGGAAAAGGAGGATTTATCGTCAATGTTGGAAGAGGGGGTTTAATTGATGAAACGGAATTGGTGAAGTGTTTGATGGAAGGGGAAATTGGAGGTGCTGGTTTTGATGTGTTTGAGAACGAGCCTCATGTTCCCAAGGAGCTCTTTAAAATGGATAATGTGGTTTTGTCTCCACATTCTGCTGCAATTACTGTGGAATCTTTCATGGATGTTTGTGAACTTATTGGAGGGAATTTAGAAGCCTTCTTCTCGAATAAGCCCCTACTTACTTCAGTTATGTTGCCTAAATAA 1008 0.4563 MAEEANNCSNHLQDLPKVLVLGPPLSFQFLQPLYSHKFNFLKPHLSDFSLQHFINHHHPPSILAILCGTKFSVTADVLRLLPSLRLVLTASAGTDHIDLSDCRRCGIQVTGVGALFSEDVADMAVALLVDGMRKISEADRWLRKNNRDNTPWDLFPLGSKLSGKRVGIVGLGSIGMEVVKRLESFGCIISYNSKHKKATVSYPFYDSVVELATNCDVLVLCCALNEQTKHIINREVILALGKGGFIVNVGRGGLIDETELVKCLMEGEIGGAGFDVFENEPHVPKELFKMDNVVLSPHSAAITVESFMDVCELIGGNLEAFFSNKPLLTSVMLPK 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01717 335 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 65 331 IPR006139 GO:0016616|GO:0051287
Spst4g01717 335 CDD HPPR 16 323 - -
Spst4g01717 335 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 15 328 - -
Spst4g01717 335 Gene3D - 117 303 - -
Spst4g01717 335 FunFam Putative 2-hydroxyacid dehydrogenase 117 303 - -
Spst4g01717 335 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 117 301 IPR036291 -
Spst4g01717 335 Gene3D - 57 326 - -
Spst4g01717 335 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 16 146 - -
Spst4g01717 335 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 126 300 IPR006140 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01717 Spst-Chr4 57108469 57111628 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01717 K15919 - gmx:100776772 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01717 4 57108469 57111628 Spst4g01717 4 57108469 57111628 ECH