Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01716 ATGAACGGCGGTGGAGGTGACCTGCCACCGCCGCACTCCAACGGCGGCGAGTTCCTCCTCTCTCTTATCCAACGCCCTCACCATCCTCAGCCCCACCCGCCGTTGCAGTCTCCGGCGATAGATCCCGCCGTCGCCGTCGTCGGTCCCACGATCCCCGTTGGCGCGCCACCGTGGCCAATCGCCGGCGCCGATCACCCTCACCCTCACCACCACCACCCTCTCCCTCACCATCTCCCTCTTTGGTCTCACACTCTCTCTTCTCCGCTTTACCCTCCGAACCTTTTCGGTTTGCCCCATAACCCGTTTCCCCCTCCTAGGACCCACTTCCCCGTTACCCCGAACTCCATCACTAACGGTGTCAACGTTAACGATAGCCTCAACCACGATCTGCGAAAACTAGGGTTTCCCATCCAAGAAAAGAACAAGATTGATGGGTCTGTCCAGCAGCAAGAACTGAAGCTGCAGTTCGGGTCTTTGCCTACTGTTGCGTACTCCGCCTCTGAAGTTTCCCCCAATGTGGACTCGTTGCTCAATTTGAAGTTCAACAGAGGCTACAACGGGTTCGACAGGAACCTGCATGTGGATCACCCTACTGCGAATTCGAGTGGGAATGTGGTTCTTCAGAGTAATCATGATGTCGTGAATAGGGAAAGAAGAGGACTCGAGGGTTATACGGCTAGTGGGTCGTTGTCTCATGAAGCTAGTAGGGTTCCACCAGGGTTTGGGAACGTGAATCGAGGGAAGGGTTTGGAAGGTAGGAAAGATGGTAGGGTGGGGGGTGGTGAAATGGGTGGTGGTAGGATTGAGAGTATGTATGATAAGAGGGAAGGTGTGAGAATGGTGTCTAGTGAAAGGAGTAATGATAGAGGCAATGGGGTGCGTGAAATGGGGCTTGTTGATCAGCTCGATCGCCCTGAGCCACCTGCTGGGAGTAACCTGCATTCGGGTGCCTCGAATGAGACTGGTGGAAGTGGTGCTCATGTTGATGCCCTTGGGGAGCAGTTGGCTGATTCATTGTTGGCAGAGGATGGCTCTGATGACAGGGCTAACTCAAGACAACGCCGTGCCACTCGAGAGAAGGATGCTAGATCATCGGATTCAAGAGGGCAGCATATCCTAAGCCAGCGGGCTAGAATGTACAAAAGGCAGGTGATTTGTCGAAGGGACATTAATGTTTTTAATGTTCCTTTCCTTGCAATATATGAGTCTCTTATACCTCCTGAAGAAGAAAAGCTGAAGCAAAATCAATTAGTAGCATTATTGGAGAAATTAGTTAACAAGGAATGGCCAGCAGCTAAGCTTTATCTCTATGGATCATGTGCTAATTCGTTTGGCGTTTCCAAAAGTGATATTGATGTTTGCGTTGCTATCGAGGAAGCAGACATGGACAAAGCTAAGATTATAATGAAATTGGCGGATATTTTGCAATCAGATAATCTGCAGAATGTGCAGGCATTGACACGTGCACGGGTTCCTATAGTAAAGCTCATGGATCCAGTGACAGGAATCTCTTGTGACATATGCATTAACAATCTCCTAGCAGTTGTGAACACAAAGCTTCTTCGGGATTATGCACTCATAGATCCAAGGTTGCGGCAGCTAGCTTTCATCATTAAACATTGGGCTAAGTCAAGAAGAGTCAATGAAACGTACCATGGGACTTTGTCTAGCTATGCGTATGTTTTGATGTGCATTCATTATTTACAAATGAGAAGACCAGCTATCCTTCCATGTTTGCAGGATATGGACACAACGTATTGCGTAACTGTGGATGATGTTAATTGTGCTTTCTTTGATAAAGTCGAAAAACTTGGTGATTTTGGTCGCCATAACAAGGAAACAATTGCGCAGCTTGTGCGGGGATTTTTCCATTATTGGGCATATTGTCATGATTATGCAAATGCGGTTATATCTGTACGCACAGGAAGCATAATAAGCAAGCGAGAGAAGGACTGGACTAGAAGAATTGGTTTAGATCGGCATTTGATATGTATAGAGGATCCTTTTGAAACATCTCATGATCTAGGGCGAGTGGTGGATAAATATAGCATCAAAGTTCTGAGGGAAGAGTTTGAACGTGCTGCTGATATTATGCAGAATGATCCAAATCCATGCAATAAACTTTTTGAGCCCTATGTTCCCAGTTGA 2148 0.4763 MNGGGGDLPPPHSNGGEFLLSLIQRPHHPQPHPPLQSPAIDPAVAVVGPTIPVGAPPWPIAGADHPHPHHHHPLPHHLPLWSHTLSSPLYPPNLFGLPHNPFPPPRTHFPVTPNSITNGVNVNDSLNHDLRKLGFPIQEKNKIDGSVQQQELKLQFGSLPTVAYSASEVSPNVDSLLNLKFNRGYNGFDRNLHVDHPTANSSGNVVLQSNHDVVNRERRGLEGYTASGSLSHEASRVPPGFGNVNRGKGLEGRKDGRVGGGEMGGGRIESMYDKREGVRMVSSERSNDRGNGVREMGLVDQLDRPEPPAGSNLHSGASNETGGSGAHVDALGEQLADSLLAEDGSDDRANSRQRRATREKDARSSDSRGQHILSQRARMYKRQVICRRDINVFNVPFLAIYESLIPPEEEKLKQNQLVALLEKLVNKEWPAAKLYLYGSCANSFGVSKSDIDVCVAIEEADMDKAKIIMKLADILQSDNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYALIDPRLRQLAFIIKHWAKSRRVNETYHGTLSSYAYVLMCIHYLQMRRPAILPCLQDMDTTYCVTVDDVNCAFFDKVEKLGDFGRHNKETIAQLVRGFFHYWAYCHDYANAVISVRTGSIISKREKDWTRRIGLDRHLICIEDPFETSHDLGRVVDKYSIKVLREEFERAADIMQNDPNPCNKLFEPYVPS 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01716 715 CDD NT_PAP_TUTase 415 525 - -
Spst4g01716 715 Gene3D - 528 696 - -
Spst4g01716 715 SUPERFAMILY Nucleotidyltransferase 398 525 IPR043519 -
Spst4g01716 715 Pfam TUTase nucleotidyltransferase domain 409 507 IPR045100 GO:0016779
Spst4g01716 715 SUPERFAMILY PAP/OAS1 substrate-binding domain 529 710 - -
Spst4g01716 715 MobiDBLite consensus disorder prediction 268 291 - -
Spst4g01716 715 PANTHER POLY A POLYMERASE CID PAP -RELATED 291 705 - -
Spst4g01716 715 MobiDBLite consensus disorder prediction 340 373 - -
Spst4g01716 715 FunFam Terminal uridylyltransferase cid1 528 696 - -
Spst4g01716 715 MobiDBLite consensus disorder prediction 341 367 - -
Spst4g01716 715 Pfam Cid1 family poly A polymerase 615 673 IPR002058 -
Spst4g01716 715 MobiDBLite consensus disorder prediction 224 327 - -
Spst4g01716 715 FunFam Terminal uridylyltransferase cid1 414 527 - -
Spst4g01716 715 Gene3D Beta Polymerase, domain 2 414 527 IPR043519 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01716 - - gmx:100812787 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01716 4 57095039 57104672 Spst4g01716 4 57095039 57104672 ECH