Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01707 ATGTGCGCAGGGAAGAGTAAGACACAGGTCTGTTGCATTTCCCACGAATTCTTTCGAACAGCGTACGCAAACCCTAATAAAATCGCAGTGGTTCACGCTACTGGCGGGGCGTACCTTTCCCGCGAGTTTCGCCGCCAAAATTCCTCCACCACCGACTTCAACGGCGACATTGCCTCGCTCTTAGAGAAACTCGTTGAGTCCACGTCTCCGCCACTCTACCGCGAGGACCAGAGCTTCACTTACTCTCATGTCTTGAACGCGGTTTGTTCCCTCAGCTCACGCCTCCGCTCTATCCTGCTTGGTGCGGATGACCCACACTTGATCACTGTCCAATCTCCAGGTAACAATGGTGTCAATTGTGAAGAGGGAACTGTACAGAAACATGAGCCCTTGGAAACTGTCATCCCTAGTGAAGAGGAATCAAGTGAAGAGCATAGGCCAAAGATAGTGGGGATTTATATGCCTCCTTCTGTTGAATATATCGTTGCTGTTCTTTCAGTACTGAGGTGTGGGGAAGCCTTCTTGCCTCTGGATCCGTTTGGGCCAAATGAAAGGATATTGTCTTTTGCCTCTTCTTCAAATGTTGATCTCATTATAGGGTCCCAATCTTCTTTTGGTAAAAGAAATTTGGACAAGCTTGATGAATCACATTGGCTGGTAAAGTCAACTAGTTGTCCTGTTTTGAATTACTCCATTGATGAAATCCTACAAGAATGTTGTGGTCCATCAGATTTAGCATGGCCTTGTTCCAATGAAAAACAAAGATCATTCTGCTATCTGATGTACACATCTGGATCAACTGGAAAGCCTAAAGGAGTGTGTGGGACTGAACAAGATAAATTTGTTGGTCCTGCCTCCAATGGTGGTCATCCATGCTCAGTAATGGTGGGGGTGTCACCTACAACAACTTTGACTATCAAGTCAATATCAAGTCTTTCTAATCGCTTTTCATGGATGCAAGGAATGTATCCTCTGAATGGGCAGGAAATATTGTTGTTTAAGTCATCAGTTAGCTTCATTGATCACCTGCAAGAATTTCTTAGTGCTATTTTGACTGCTTGTGTGTTAGTTATTCCTCCTTTCGATGAGCTAAAAGAAAATTTATATTCTATGATAGATTTCCTGCAGGCATATTTTGTTAATAGGCTCACAGCTGTTCCATCTCTAATGAAGACTATTCTTCCTGGATTGCAAACCAATACTAACATGCGGGTTGAAAATTCACTGAAATTGCTTGTGCTTAGCGGTGAAACTTTTCCTTTAACATTGTGGAAGATGCTTTCAAATATATTACCGAAGACATCAATCTTGAATTTATATGGAACCACTGAGGTTAGAGCAGAAGGTTATCTTTCTACAGAAGAAATGCTAACGAGTGTTCCAATAGGTTTACCCATTCCTAACTGTGATGTGATTCTTCTTAGTGAAAATGGTGCATCAAATGAGGGAGAGCTGTATGTTGGTGGTCCTTGCATCTTTAGGGGTTACTACAACGACTCTGATGAAATGTCTGATGCATTTGCAAAGTTGCTTCAAAGTTACAGTTGTGGTGATTCTATTAACGCTTGCCAAGACCAATTATACTTTAGAACTGGTGACTTTGTCAAACAGTTGCCAAGTGGTGATTTTGTATTTTTGGGAAGAAAAGATCGCATTATAAATATCAATGGACAGCGTATTGCCCTTGAAGAGGTTGAAGATTTGCTAAGGGAGCATCCAGATATAAATGATGCTGCTGTAGTTTGTCGAGATAATCAATCAGAACTTGTGCTTCTTGAAGCCTTTATCATATTAAAGAAAAAGGAAAACTCGGATGAATTATTAATACCTGCAATCAGAACTTGGATGATTAACAAACTTCCTTCAGTTGTACTTCCCAACCGTTTCTTATTTATAGAATCATTTCCTGTGTCTCCTAGTGGTAAGATTAATTATGAATTGTTGGTTGGCTCAGCATTATTGACAAAGAATGTCAAGGATAAAGTTGGTAACATCGACTGCAGAAATCTTCTGCAACTTATTAAAAAGGCATTTCATGACGCTTTAATGGTTGAAAAGGTTTGTGATGATGATGATTTCTTTATGATGGGCGGTAACTCTCTTTCTGCTGCACATGTTGCTTACAGTTTGGGGATTGACTTGAGATTTCTTTACTACTATCCAAGTCCTCTTAAGCTTTGTATGGCTCTTCTCCAGAACAAAGGATCATGCCCTTTGCATAACAGTCTGGATAGTTGTTTGCAAATATGCACGGACAGACAAGATAACCATATTTCTTCTAATCATACTGAAAATTCTAGTCCTCTTGAGTCAAGGATAATTTCCAAAGATAATGATGACGATTCTTTTCCTTCTAAACGTTTAAAGTGGGGTTGGACAGATGTTACATCACGGGGTGATGAATCATTCCCATGGTATTCCCCTTCACTATTATCATTCTCATTTAACCGAGGCAACAAGGTGTTGCATAAAGGGCAGCAGGCAGTTATTGGTACACACCAAACAACTTCGTCTGCTGATGTTCCCAGAGGCAACAGAGGTCATATGAAAGACTTTTGGAAAGTTGACATGGAATCTTGTGTTGATGCTTCACCAATGCTTGTGTTTAAAGGCCCAGATTGGGAGATCAAACTAGAAGGACGCATTGAATGTACAGCAGCAATTGTTTCTGATTTTTCCCAGGATTTGGAACTGAATTTAGAGGATAGCGCTCTGATTACAAAGTTACCATGTGGAGGCAGTATATATGGGTCGCCTGCAATCGATGAGGTTCGTGACTTGCTTTACGTGGCCTCTACTGGTGGTCGTATAACAGCTATATCAATATCGGCTTCTCCATTTACTGTTTTGTGGCTAAATGAATTAGAAGTTCCTGTGTTTGGTTCTCTTGCAGTTGCCCACAATGGAACTGATGGTCATGTTCTTGCATTGAATCCAAATGGATCCATTGTTTGGAAGAAAACAACTGATGGTCCAATATTTGCTGGGTCATGCATGCCTTCTGTTCTTCCTCATGAGGAGGAGGGCGACCTACTATGGGAATACAATGTAGGAGATCCAATTACAGCATCGGCTTATGTGGACGAGCACTTAGTGCTGGACTCTGATGCTTCCAATTCCTCAGACAGGTTAATTTGCATTTGTTCCAGTTCTGGAGGCATACACCTTCTTCGAGTTAACATGAATAATTCCAAAGATTCAAATCAACAAAGAAGGTATGTGGAAGAATTTGCAAAGCTAAACTTGGCAGGGGATATATTCTCTTCACCCTTAATGATTGGTGGTCGGATTTTTGTTGGTTGTCGGGACGAATACTTGCATTGTATTGTCATTGAAATTCCAAACCAACATAAAAGTTAG 3360 0.4086 MCAGKSKTQVCCISHEFFRTAYANPNKIAVVHATGGAYLSREFRRQNSSTTDFNGDIASLLEKLVESTSPPLYREDQSFTYSHVLNAVCSLSSRLRSILLGADDPHLITVQSPGNNGVNCEEGTVQKHEPLETVIPSEEESSEEHRPKIVGIYMPPSVEYIVAVLSVLRCGEAFLPLDPFGPNERILSFASSSNVDLIIGSQSSFGKRNLDKLDESHWLVKSTSCPVLNYSIDEILQECCGPSDLAWPCSNEKQRSFCYLMYTSGSTGKPKGVCGTEQDKFVGPASNGGHPCSVMVGVSPTTTLTIKSISSLSNRFSWMQGMYPLNGQEILLFKSSVSFIDHLQEFLSAILTACVLVIPPFDELKENLYSMIDFLQAYFVNRLTAVPSLMKTILPGLQTNTNMRVENSLKLLVLSGETFPLTLWKMLSNILPKTSILNLYGTTEVRAEGYLSTEEMLTSVPIGLPIPNCDVILLSENGASNEGELYVGGPCIFRGYYNDSDEMSDAFAKLLQSYSCGDSINACQDQLYFRTGDFVKQLPSGDFVFLGRKDRIININGQRIALEEVEDLLREHPDINDAAVVCRDNQSELVLLEAFIILKKKENSDELLIPAIRTWMINKLPSVVLPNRFLFIESFPVSPSGKINYELLVGSALLTKNVKDKVGNIDCRNLLQLIKKAFHDALMVEKVCDDDDFFMMGGNSLSAAHVAYSLGIDLRFLYYYPSPLKLCMALLQNKGSCPLHNSLDSCLQICTDRQDNHISSNHTENSSPLESRIISKDNDDDSFPSKRLKWGWTDVTSRGDESFPWYSPSLLSFSFNRGNKVLHKGQQAVIGTHQTTSSADVPRGNRGHMKDFWKVDMESCVDASPMLVFKGPDWEIKLEGRIECTAAIVSDFSQDLELNLEDSALITKLPCGGSIYGSPAIDEVRDLLYVASTGGRITAISISASPFTVLWLNELEVPVFGSLAVAHNGTDGHVLALNPNGSIVWKKTTDGPIFAGSCMPSVLPHEEEGDLLWEYNVGDPITASAYVDEHLVLDSDASNSSDRLICICSSSGGIHLLRVNMNNSKDSNQQRRYVEEFAKLNLAGDIFSSPLMIGGRIFVGCRDEYLHCIVIEIPNQHKS 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01707 1119 Gene3D - 893 1005 IPR015943 GO:0005515
Spst4g01707 1119 SUPERFAMILY Acetyl-CoA synthetase-like 69 649 - -
Spst4g01707 1119 Pfam AMP-binding enzyme C-terminal domain 564 642 IPR025110 -
Spst4g01707 1119 Gene3D - 307 549 IPR042099 -
Spst4g01707 1119 ProSitePatterns Putative AMP-binding domain signature. 260 271 IPR020845 -
Spst4g01707 1119 Gene3D - 11 277 - -
Spst4g01707 1119 PANTHER BETA-ALANINE-ACTIVATING ENZYME 9 870 - -
Spst4g01707 1119 CDD A_NRPS 145 648 - -
Spst4g01707 1119 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 900 1112 IPR011047 -
Spst4g01707 1119 Pfam AMP-binding enzyme 149 555 IPR000873 -
Spst4g01707 1119 Gene3D - 668 730 IPR036736 -
Spst4g01707 1119 Gene3D - 1006 1111 IPR015943 GO:0005515
Spst4g01707 1119 Gene3D - 550 657 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01707 Spst-Chr4 56976381 56991698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01707 259 648 Acyl Lipid Metabolism Gene Families AT5G36880 22.760 1.44e-16 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01707 K00142 - gmx:100820175 1662.12