Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01671 ATGTCGTTATCCGATTTCGAAACCTCCCACGGCGGAACATCGGAGTACAAGCCGTTCCGCCAAATCAGTCGCGAACGGTTATTATATGAAATGCTTGGATCGGCAAAGTCACCCGATTCGAAGGCATGGAAGGTGCTCATAATGGACAAAGTCACAGTGAAAGTTATGTCACATTCGTGTAAAATGGCAGATATTACAGACCAAGAAATTTCCTTGGTGGAAGATCTATTTCGGAGAAGGCAACCATTACCATCTTTGGATGTTGTTTATTTCATGCAGCCTTCTAAAGAGAATGTGGTCATGTTCCTGTCTGATATGTCTGGAAGGGAGCCCCTGTACAAGAAGTATGGGAAGCATTCTAAATTTTCCCCAAATGAATATTGTTTCAACTTTTTTAAGCTTAACTCAGGACAAAACATGAATTTCGAATATTTTCCAATAGATAGCCAGGGGAAAAATGAGTTTTCTACTGAGATGTATATGATGCAGGGGTTTACCACTGATCAAGACACAGCATTGGACGACCTTTATGGCAATTACCAGAATACTCGCAAATTTAACACCAGCTTGAATACTATGGCAATTCGAATAGCTACAGTTTTTGCTTCCTTGAAGATGCTAATGGACTGCTCTCGACTCACTGAAACGAGAGAGTTACAGGAGTTACCTTGTGTGTGGTATCGTGCTGCAAAGGAAAGTGAAGAGACTACAGCAGCAGCAGTTCGAGAATTAGTTCCTACCAAGCTTGCTAATGCTGTTTGGGACATGGTTTCTAAATATAAATCTACCATTCCCGGTTTTCCACAAAATGAAACTTGTGATCTGCTCATCATTGACAGATCCGTAGATCAGATTGCTCCTGTCATTCATGAATGGACTTATGATGCTATGTGCCACGATCTGTTGAATATGGACGGAGATAAATATATGCATGAGGTTCCCAGCAAAACCGGGGGTGAACCTGAGATGAAGGAGGTCCTTCTACAAGAGCATGATTCAGTCTGGCTTGAACTTCGCCACGCTCATATAGCAGATGCTAGTGAAAGACTGCATGAAAAATTTACCAATTTCGTATCAAAGAACAAAGCAGCACAAATGCAACAAAGAGGAAGGAGGGACACAATAACAGGTAGGCTTGACACAGAATTATATAGAGCCGGAGAACCATGGGAATTAGAGAGAGCAAGGAATCGTCAGGATCTATATAGTGGTAGAGTACATAAAGATGGTAATGAAATATCTACGCGAGATTTGCAAAAAATGGTTCAAGCATTGCCACAATACACTGAGCAAGTGGAAAAGATTTCACTCCATGTAGAGATAGCTGGAAAGATCAACAAAATTATCAGAGAAACTGAACTTAGAGCGCTTGGACAGTTAGAACAAGATCTTGTTTTTGGGGATGCTGGAGCCAAGGAAGTTATTACCTTTTTAAGAACAAAGCAGAGTACAACTCCTGAATATAAGTTGCGTTTGTTGATGATTTATGCATATGTCTATCCAGAAAAGTTCGAGGGCGATAAAGCTTCAAAGCTGATGCAGTTGGCAAAACTATCACCTGATGATATGAAAGTTATCAGTAACATGCAACTGCTGGCGGGATCATCATCAAACAAGAAATCATCTACTGATGGTGGGTTCTCACTCAAGTTCAATAACCAGAAGATAAAGCATGCAGCTCGCAAAGATAGGACCGACGAAGAGGAAGAAACATGGCAATTGTTTCGATTTTATCCCATGTTAGAGGAGCTCATTGAAAATCTCAATAAGCGTGAATTGCCCAAGGATAAATATTCGTGTAAAAATGAGCCAAGTTGTAGTAGTGTCCCTCCAGGGGGTTCAACTAGAAACGGTCAAAAACCACAGGCAGCTCCGACCAGTGCTCATAATTCAATTAAATCCAGGAGGACAGCAAATTGGGGACGATCTCGTACTTCAGATGATGGATATTCAAGTGATTCCACGTTGAAGAATGTGACTGCTGATTTCAAGAAGATGGGAAAGCGAATCGTTGTGTTTATTATTGGCGGGGCTACTCGATCTGAGCTGCGAGTTTGTCACAAGTTGACTACAAAATTAAAAAGGGAAGTAATCCTAGGTACTACTTCCATGGATGATCCTCCACAATATCTTACGAAATTAAAGTTATTGGGCGACAGCAAAGTTCCAGTAATGGATGGCCTCGGCATATAA 2193 0.4118 MSLSDFETSHGGTSEYKPFRQISRERLLYEMLGSAKSPDSKAWKVLIMDKVTVKVMSHSCKMADITDQEISLVEDLFRRRQPLPSLDVVYFMQPSKENVVMFLSDMSGREPLYKKYGKHSKFSPNEYCFNFFKLNSGQNMNFEYFPIDSQGKNEFSTEMYMMQGFTTDQDTALDDLYGNYQNTRKFNTSLNTMAIRIATVFASLKMLMDCSRLTETRELQELPCVWYRAAKESEETTAAAVRELVPTKLANAVWDMVSKYKSTIPGFPQNETCDLLIIDRSVDQIAPVIHEWTYDAMCHDLLNMDGDKYMHEVPSKTGGEPEMKEVLLQEHDSVWLELRHAHIADASERLHEKFTNFVSKNKAAQMQQRGRRDTITGRLDTELYRAGEPWELERARNRQDLYSGRVHKDGNEISTRDLQKMVQALPQYTEQVEKISLHVEIAGKINKIIRETELRALGQLEQDLVFGDAGAKEVITFLRTKQSTTPEYKLRLLMIYAYVYPEKFEGDKASKLMQLAKLSPDDMKVISNMQLLAGSSSNKKSSTDGGFSLKFNNQKIKHAARKDRTDEEEETWQLFRFYPMLEELIENLNKRELPKDKYSCKNEPSCSSVPPGGSTRNGQKPQAAPTSAHNSIKSRRTANWGRSRTSDDGYSSDSTLKNVTADFKKMGKRIVVFIIGGATRSELRVCHKLTTKLKREVILGTTSMDDPPQYLTKLKLLGDSKVPVMDGLGI 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01671 730 MobiDBLite consensus disorder prediction 596 654 - -
Spst4g01671 730 Pfam Sec1 family 44 711 IPR001619 GO:0016192
Spst4g01671 730 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 291 451 IPR043127 -
Spst4g01671 730 Gene3D - 164 600 IPR027482 -
Spst4g01671 730 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 31 714 IPR001619 GO:0016192
Spst4g01671 730 Gene3D - 12 120 IPR043154 -
Spst4g01671 730 Gene3D - 661 714 IPR027482 -
Spst4g01671 730 PIRSF VPS45_Sec1 14 376 IPR001619 GO:0016192
Spst4g01671 730 PIRSF VPS45_Sec1 394 722 IPR001619 GO:0016192
Spst4g01671 730 Gene3D - 452 578 - -
Spst4g01671 730 MobiDBLite consensus disorder prediction 601 654 - -
Spst4g01671 730 SUPERFAMILY Sec1/munc18-like (SM) proteins 19 719 IPR036045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01671 Spst-Chr4 56435940 56448969 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01671 K15292 - gmx:100787667 1053.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01671 4 56435940 56448969 Spst4g01671 4 56435940 56448969 ECH