Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01647 ATGGAAGTGGGTATGCTTCCAATCTCGGCTTCCAAGAGAGGAAAACTCTTGGCTGCTGGTTACACCACTCTCGATGCCATTGCTCGTGCCTCCCCCTCCCACCTTGCTCGAGACATTGAAGTTTCTGATAATGAAGCCTCGGAAATTCTAAATCTTGCAGCCAAAGCTAGTGCTTCGGAGAAACCAAATGAGACACACACTACTGTTGTTGGTGGTGGTCGGACTGCCTGGGATATGCTCAATGATGAGAAGTTTTCTTCTTACATTACCACATCTTGTGTGGATCTGGATAACATCCTTGGTGGAGGAATTAAGTGCAAAGACGTCACTGAAATAGGTGGAGTTCCAGGCATTGGTAAAACACAAATTGGGATTCAACTTGCAGTAAATGTTCAAATTCCACAAGACTACGGTGGCCTAGGTGGGAAGGCAATATACATTGACACAGAAGGAAGCTTTATGGTTGAACGAGTTCTTCAAATTGCTGAAGCATGCATAGAAGACATGGAAGAATATAGGAACCACTTTCACAAGGATTTTCAAGCTTGTGATGTTAAAATGCACCCTAATAATATCTTGGAAAATATATTCTATTTTCGTGTTTGCAGCTACACCGAGCAAATTGCATTGGTAAATTACCTAGACAAATTCATCATGGAGAATAAAGATGTAAAGATCATCATTGTTGACAGTGTTACTTTCCACTTCCGCCAAGACTTCGATGATATGGCTCTCAGGACTCGATTACTCAGTGAAATGGCTTTGAAGTTGATGAAGCTAGCAAAAAAGTTCTGTTTGGCTGTTGTTATGTTGAATCAAGTTACAACCAAGTTCATTGAAGGTTCATTTCATTTGACCCTTGCACTAGGAGATAGCTGGTCACATTCATGCACAAACAGGATAATCTTATTTTGGAATGGCAATGAACGACATGCATTTATTGACAAGTCCCCTTCTCTTAAATCAGCATCAGCTCCATATTCGGTCACCACTAGGGGCATACGTAATTCCACTTCAAACTGCAAACGAATCAAGATGATGAACACCTCAGGTATGGTTCTGTGTCTTCTCTGTCATGGTTGGAACCTCAAACTTGGTTGGCTGTATCTTAGGGGCACCGTCAAGTTCGCCGTCAGCTTCTCCTACAAAGAGCTTCGTTCATATCTTCTCCCACAGGTATGGTTCATATGTTATTTTCCATGGTTGCAACTTGAAACTGGTTCTACTGGTGTTGTACTCCATGCATGGTTGAGGTAA 1257 0.42 MEVGMLPISASKRGKLLAAGYTTLDAIARASPSHLARDIEVSDNEASEILNLAAKASASEKPNETHTTVVGGGRTAWDMLNDEKFSSYITTSCVDLDNILGGGIKCKDVTEIGGVPGIGKTQIGIQLAVNVQIPQDYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMEEYRNHFHKDFQACDVKMHPNNILENIFYFRVCSYTEQIALVNYLDKFIMENKDVKIIIVDSVTFHFRQDFDDMALRTRLLSEMALKLMKLAKKFCLAVVMLNQVTTKFIEGSFHLTLALGDSWSHSCTNRIILFWNGNERHAFIDKSPSLKSASAPYSVTTRGIRNSTSNCKRIKMMNTSGMVLCLLCHGWNLKLGWLYLRGTVKFAVSFSYKELRSYLLPQVWFICYFPWLQLETGSTGVVLHAWLR 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01647 418 Pfam Rad51 75 336 IPR013632 -
Spst4g01647 418 ProSiteProfiles RecA family profile 1. 85 274 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Spst4g01647 418 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C 1 347 - -
Spst4g01647 418 Gene3D - 14 61 - -
Spst4g01647 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 335 IPR027417 -
Spst4g01647 418 Gene3D - 70 338 IPR027417 -
Spst4g01647 418 SUPERFAMILY Rad51 N-terminal domain-like 4 55 IPR010995 GO:0000166
Spst4g01647 418 CDD Rad51C 109 318 - -
Spst4g01647 418 FunFam DNA repair protein RAD51 72 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01647 Spst-Chr4 56122119 56131173 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01647 K10870 - gmx:100527406 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01647 4 56122119 56131173 Spst4g01647 4 56122119 56131173 ECH