Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01643 ATGCCAGCACTAAATGCAGCAAAAGTATCTGCTGCTATGTTAGAGAAAGGCCAAAGTCGTGTAATAGATGCTTCACTTACACTCATTCGAGAAAGAGCAAAGCTAAAGGCATGCTTTGCGTCAAAGCAATATAATTTTGGAGTTCTTTTTCTCCAGGGAGAACTTGTGCGTGCCTTGGGAGGTGCTAAAGCAACTTCAACTCTTCTTGGAGTTCCTTTGGGACATAATTCATCATTCCTTCAAGGACCTGCATTTGCACCTCCACGCATTAGGGAGGCCATTTGGTGTGGTAGCACAAACTCAACAACTGAAGAAGGCAAGGAGTTACAAGATGCAAGGGTTCTAACTGATGTTGGTGATGTCCCGATTCAAGAAATTCGAGATTGTGGGGTAGATGATCACAGATTAATGAATGTAATTGGTGAATCTGTAAAACTAGTAATGGATGAGGATCCATTACGCCCCTTAGTTTTGGGTGGTGATCACTCAATATCATTTCCAGTTATCCGAGCTGTCTCCGAGAAGCTTGGAGGACCCGTTGATGTTCTTCATCTTGATGCGCATCCTGATAACTACGATGCTTTTGAAGGAAACATTTATTCACATGCTTCTTCTTTTGCTCGAGTCATGGAGGGTGACTATGTGCGGCGACTTTTGCAGGTCGGTATAAGATCAATAACAGCTGAAGGGCGTGCACAAGCCAAAAAATTTGGGGTTGAGCAATATGAAATGCGGACATTTTCAAGAGATCGTGACTTCTTAGAAAATCTGAGTCTAGGGGAAGGTGTTAAAGGTGTATATATCTCAATAGATGTGGATTGTCTAGATCCCGCCTTTGCTCCAGGAGTATCTCACATAGAGCCAGGTGGCCTCTCTTTCCGTGATGTTCTCAACATCCTGCACAATCTTCAAGGTGATGTTGTCGCCGGAGACGTTGTCGAGTTAAACCCTCAACGAGATACTGTCGATGGAATGACTGCCATGGTAGCTGCCAAGCTGGTGAGAGAACTGGCTGCAAAGATTTCTAAGTGA 1032 0.4409 MPALNAAKVSAAMLEKGQSRVIDASLTLIRERAKLKACFASKQYNFGVLFLQGELVRALGGAKATSTLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELQDARVLTDVGDVPIQEIRDCGVDDHRLMNVIGESVKLVMDEDPLRPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDNYDAFEGNIYSHASSFARVMEGDYVRRLLQVGIRSITAEGRAQAKKFGVEQYEMRTFSRDRDFLENLSLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQGDVVAGDVVELNPQRDTVDGMTAMVAAKLVRELAAKISK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01643 343 PIRSF Arginase 59 343 IPR006035 GO:0046872
Spst4g01643 343 ProSitePatterns Arginase family signature. 269 290 IPR020855 GO:0016813|GO:0046872
Spst4g01643 343 Gene3D Ureohydrolase domain 58 343 - -
Spst4g01643 343 FunFam Arginase 1, mitochondrial 56 343 - -
Spst4g01643 343 SUPERFAMILY Arginase/deacetylase 62 339 IPR023696 -
Spst4g01643 343 ProSiteProfiles Arginase family profile. 57 343 IPR006035 GO:0046872
Spst4g01643 343 Pfam Arginase family 67 337 IPR006035 GO:0046872
Spst4g01643 343 CDD Agmatinase-like_2 68 338 - -
Spst4g01643 343 PANTHER ARGINASE/AGMATINASE 4 343 IPR006035 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01643 Spst-Chr4 56082499 56085340 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01643 K01476 - gmx:100789799 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01643 4 56082499 56085340 Spst4g01643 4 56082499 56085340 ECH