Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01634 ATGTTTGAAAATGCCTCCTCCGATTGTTCAGACTCCATTTCTTGCTCTGCAACCCTAAGTTTCAGCTGTTCTCAATCGATGGCTGGTGAATCTGATGTCCCGGGAAACACCCTCTCTTGCGCTAACTGTGGAAAACCCGCCAATCTTCAGTACTCTTTCTTCGCTCTATTTAATTTTCTCTTTATGTGGTTTACAGCTGCTCACAAGTGCCCAAAATGCATTGAATTGAAGCTTCCTCGTGAAGGTTCTGCCTTCTGTGATTCTAGACAAGACTTGAGTTCTTTGACTATTCGCCGAGAGATAATTGGTCCTTTTGATTCCTATTCAATTATAGCAGCTGGCCCCAAAACCACTGCGGTGGAATGTTTCAAGTCTTCATGGAGCTCGCACAAATCAGTGCATCTGAAGGAAAAACTATCTTCACCTGGCACACAAAATTCTGGCTCACTTGGTGAAGATTGGTTATATTGTTTGAAGAGAGGGCAGGCTCGAACACCAAAGCTCCCTTACTTTGATTGGACTGGACCACTGCGGCCATATCCCATTTCTAGTAAACGGATTGTCCCAGACCAAATTGAGAAACCTGATTGGGCTGATGATGGAATTCCCAAAATTGAGCCCAATAGTGGTCTGCAGCATACTGTTGAGATCAAAACTCCAGATCAAATTGAGAGAATGAGGGAAACTTGTCGGATTGCAAGGGAGGTGTTGGATGCAGCTGCTCGGATCATTCAGCCTGGTGTGACGACTGATGAGATTGACAGAGTTGTTCATGAGGCCACTATTGCTGCAGGAGGATATCCTTCACCTCTCAATTACCATTTTTTCCCTAAATCTTGCTGCACGTCAGTTAATGAAGTAATCTGCCATGGAATTCCTGATGCAAGGAAGCTTGAGGATGGTGACATTGTCAATGTTGATGTCACTGTGTGCTATAAAGGTGTTCATGGTGATCTCAATGAAACATACTTTGTAGGAAATGTTGATGAAGAGTCTCGCCAGCTAGTAAAATGCACTTATGAGTGCCTGGAGAAGGCAATATCCATTGTTAAACCTGGGGTACGATTCCGTGAAATTGGTGAAGTTATTAATCGTCATGCTTTAATGTGTGGCTTCGCAGTGGTAAAATCGTATTGTGGTCATGGAATTGGAGAGCTCTTCCATTGCGCACCAAACATTCCTCATTATGCAAAAAACAAAGCAGTTGGTGTGATGAAGGCTGGACAGACCTTTACAATTGAACCAATGATCAATGCTGGAGTCTGGCGAGATCGAATGTGGCCTGATGGATGGACTGCTGTTACAGCCGATGGTAAACGAAGTGCTCAATTTGAGCACACTCTTTTGGTGACGGAAACTGGTGTTGAAGTTTTAACTGGGAGGTTGCAGACATCACCCAAAGTTTTTCCTTGGCTAAATTCATAA 1425 0.4379 MFENASSDCSDSISCSATLSFSCSQSMAGESDVPGNTLSCANCGKPANLQYSFFALFNFLFMWFTAAHKCPKCIELKLPREGSAFCDSRQDLSSLTIRREIIGPFDSYSIIAAGPKTTAVECFKSSWSSHKSVHLKEKLSSPGTQNSGSLGEDWLYCLKRGQARTPKLPYFDWTGPLRPYPISSKRIVPDQIEKPDWADDGIPKIEPNSGLQHTVEIKTPDQIERMRETCRIAREVLDAAARIIQPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVCYKGVHGDLNETYFVGNVDEESRQLVKCTYECLEKAISIVKPGVRFREIGEVINRHALMCGFAVVKSYCGHGIGELFHCAPNIPHYAKNKAVGVMKAGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTGRLQTSPKVFPWLNS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01634 474 FunFam Methionine aminopeptidase 171 467 - -
Spst4g01634 474 Hamap Methionine aminopeptidase [map]. 215 461 IPR002467 GO:0006508|GO:0070006
Spst4g01634 474 PANTHER METHIONINE AMINOPEPTIDASE 67 461 - -
Spst4g01634 474 SUPERFAMILY Creatinase/aminopeptidase 169 460 IPR036005 -
Spst4g01634 474 Pfam Metallopeptidase family M24 224 452 IPR000994 -
Spst4g01634 474 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 378 396 IPR002467 GO:0006508|GO:0070006
Spst4g01634 474 CDD MetAP1 223 459 IPR002467 GO:0006508|GO:0070006
Spst4g01634 474 Gene3D Creatinase/methionine aminopeptidase superfamily 171 471 IPR036005 -
Spst4g01634 474 PRINTS Methionine aminopeptidase-1 signature 280 293 IPR001714 -
Spst4g01634 474 PRINTS Methionine aminopeptidase-1 signature 372 384 IPR001714 -
Spst4g01634 474 PRINTS Methionine aminopeptidase-1 signature 302 318 IPR001714 -
Spst4g01634 474 PRINTS Methionine aminopeptidase-1 signature 403 415 IPR001714 -
Spst4g01634 474 NCBIfam methionine aminopeptidase, type I 216 460 IPR002467 GO:0006508|GO:0070006
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01634 Spst-Chr4 56030074 56036497 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01634 K01265 - gmx:100813779 753.821