Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01627 ATGTTCATAACCCTTCAATTAGACTCAACTCATAGAATCATTTTAGCTTTGAAATTCTCATATCTTCTATTTTTCTTTTCTTCGATTCCTATTGCCCAAGCCTACGCTAGTAGAGCTCATTTCTTCATTTATGCTGGCTGCTCTCAAGAAAAATACCAACCAAACACACCCTTTGAAGCCAACCTCAATTCCTTTTTGTCTTCAGTTTCTGGCTCATCTTCTGACAATTCTTACAATAGCTATGCTATTGGAAATGGAAGTTCATCACCACCAGAGGGATCCATATATGGCTTATACCAGTGCAGGAGTGATTTGAGGCCAAATGATTGCTCAAAATGTGTTAAAAGTTGTGTTGACCAAATAGGCTTGGTCTGTCCCTTGGCACTTGGGGCATCTTTGCAACTTGAAGGCTGTTATATAAGATATGAGCATGTTGATTTCCTTGGCAAGCCTGACACAAGCCTTTGGTACAAGAAGTGCAGTAAAGCAGTGACAAATGATGCTGAGTTCTTCAGGCGTAGAGATGATGTTCTTTCTGATTTGCAAGCAGCTAATGGATTTGGAGTCAGTACTTCTGGTTTTGTTGAAGGGTTTGCACTGTGTTTGGGAGATTTGAATGTGGCTGATTGCTCCTCATGCCTTCAAGCAGCAGTGGGAAAGCTTAGGAGCATATGTGGATCAGCAGCATCTGCTGATGTGTTCTTGGCACAATGTTATGCTCGGTACTGGGAAGCTGGCTACTATGATGAAGCAGATTCTTGGAAGGAGGATGACGAAGTGGGGAAATCAGTTGCCATTATTGTGGGAGTGCTTGCTGCTCTAGCCATTCTTGTTGTCCTTCTCTCAATCTGCAGAAGAGCATTTGGAGTACACAGCTAA 879 0.4232 MFITLQLDSTHRIILALKFSYLLFFFSSIPIAQAYASRAHFFIYAGCSQEKYQPNTPFEANLNSFLSSVSGSSSDNSYNSYAIGNGSSSPPEGSIYGLYQCRSDLRPNDCSKCVKSCVDQIGLVCPLALGASLQLEGCYIRYEHVDFLGKPDTSLWYKKCSKAVTNDAEFFRRRDDVLSDLQAANGFGVSTSGFVEGFALCLGDLNVADCSSCLQAAVGKLRSICGSAASADVFLAQCYARYWEAGYYDEADSWKEDDEVGKSVAIIVGVLAALAILVVLLSICRRAFGVHS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01627 292 ProSiteProfiles Gnk2-homologous domain profile. 40 147 IPR002902 -
Spst4g01627 292 FunFam cysteine-rich repeat secretory protein 3 39 147 - -
Spst4g01627 292 Gene3D - 39 147 IPR038408 -
Spst4g01627 292 Gene3D - 153 245 IPR038408 -
Spst4g01627 292 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 16 287 - -
Spst4g01627 292 FunFam Cysteine-rich repeat secretory protein 15 152 245 - -
Spst4g01627 292 ProSiteProfiles Gnk2-homologous domain profile. 149 247 IPR002902 -
Spst4g01627 292 Pfam Salt stress response/antifungal 47 144 IPR002902 -
Spst4g01627 292 Pfam Salt stress response/antifungal 160 242 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01627 Spst-Chr4 55941448 55944637 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01627 41 251 Receptor kinase-like Gene Family AT4G23160 26.957 1.06e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01627 - - gmx:100809227 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01627 4 55941448 55944637 Spst4g01627 4 55941448 55944637 ECH