Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01625 ATGAGGGATCCGAATCTGGAGTTGCAGGAATCGGGTTGGGAGGAACTGCGTAAGGAAGCGCGCAAGATCGAGGGCGATCTGGACGTCAAGCTCTCTTCCTACGCCAAACTCGGGGCTCGCTTCACACAATCAGGCAATGTGGATGGTGGTTCACCACCTCTTGGGTCCAATAGGTCTTGGAAATCAATGGAAATGGAAATCCAGTCTTTGCTTGAGAAACTGTTGGACATAAATGATTCAATGAGTAGATGTGCTGCATCTGCCGGACCAGCTACTTCTGTAACTCAAAAGTTGGCTAGGCACAGAGACATCCTTCATGAGTTTACCCAGATCCTAAGAATTGGTGCATTTTTTTTCCATCTTGTAATGCTTGGTGCAGATTAG 384 0.474 MRDPNLELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQSGNVDGGSPPLGSNRSWKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQILRIGAFFFHLVMLGAD 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01625 127 PANTHER GOS-28 SNARE- RELATED 9 110 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01625 Spst-Chr4 55866775 55868038 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01625 K08495 - pvu:PHAVU_010G079500g 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01625 4 55866775 55868038 Spst4g01625 4 55866775 55868038 ECH