Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01590 ATGCCAACAACAAATCAACACACCGTCTCATCTCCTCTCCCTCTCCTCCATGCACCGCGCCTCCCATCGTTGCCGTACTCCGATCGCGTCCAACTCAAGGCTCTGCTCGCCCAACCGGACTTCGCCGCCGGACAGCGTGTGGTTGTCGGCGGATGGGTGAAGTCGGCCAAGGAGGAAGAGAACCCGACGGCGCCGAATCCGTCAACCAGAACGGATGACGCCGCCAGAGACCGTAGGAGCAAGGACGTGTCGTGTGTGGAGATTCTGCAATCGCGGATACCGTTGATTCGGAACCTATGGGATGTGTTCGGAGGAAGCGGTCACGCGCAGCACAAGAAACGTGAGTCTGCTCTGACTGTGCCGAATCAGACAAAGGCTTTTCCTCCAAAAATTGCGCGTCTGCTTCTAACGGATGGGTCATGCGTCCAAAGCCTTCAGGTTGTCGTGGATTCCTCGGTTGCAAACCCAAGCCGGCTCATGCCTACTGGCACGTGTCTATTAGTGGAAGGTCAACTAAAACGAATAGAGGGAAAGCATGATATTGAGCTTAAAGCGGAAAAAGTCCATCACATTGGGACTGTAGATTTTGATAAGTACCCATTATCAAAAAAACGAATTCCACTGGATACATTGAGAGATTACTCCCAGTTTCGGCCTCGAACAACCACGGTGGCAACTGTCATGCGGATTCGTAGTGCTCTCTCTTTTGCAACCCACACATTTTTCAATGAACATGCATTTATTGATGTGCACGTACCCACTATAACTACCACAGACTCAGAAGGATTTAGCAACATGTTCAAGGTTACCACCCTGGATCAGAATCAGAAAGCAGAGAAGGAGAAACTAGAAACTATTTATGAGAATGAAGGTGTTAGACTTGAACATGTGAAGGCAGCTGTAAAAGAGAAAAGCAACATAGTTGAGCATTTGAAAAGAACTGAGAGCAATAGGGAAGCACTGGCAGCTGCAGTTCAGGATCTGAAGAAAACAAATGACCTGGCATCACAATTGGAAGCAAGAGAAAAGAAGTTAGGAACATCTTTAAAGGATGATAAAGTCGACTCTTCCAAGGATTTCTTCCCTTTCCAAACTTATTTGACTGTCTCTGGTCGCTTGCATCTGGAGAGTTATGCATGTGCACTTGGAAATGTCTACTCGTTTGGACCCAGATTTCTAGTAGATAAAACGAGTTCTGCCAAAAATGCTGCAGAAATGTGGATGGTTGAGGTGGAAATGGCTTTTTCTCAGTTGGAGGATTCCATGAAATGCGCTAATGACTTTTTCAAGTACCTCTGCAACTGGGTTGTGAACAATTGCTCTGAAGAATTGAAATTTGTTGCAAAAAGAATTGACAACACCTGTTTCGATCGTCTTAAGGGTATTAGATCAGATTCTTCTAAGATGACCTATCATGAAGCCATAGATCTTCTTAGAAAGTCATCCTCCCAGACTGAAGATAAGAAATTTGAAACAAACTTTGAGCCAGGTTTGGTACTCACTTCAGAGCACCTAAGTTATCTAGCTGATGTCATATGCAAGAATCCGGTAATAATATACAATTATCCAAAAGAGGCTAAGCCATTTTACGTTCGCCAGAATGATGATGGAACTGTTGCTGCGTTTGACTTGGTAGTCCCTAAGCTTGGAACAATAATTTCTGGTAGCCAAAACGAGGAACGTCTTAACATGATAAGCTCCAGGATTGATGAATTAGGTTTGGCAAGAGAGAAGTATGAATGGTACCTAGATCTTCGTAGAAACGGAACAGTGAATAACTCTGGGTTCACTCTAAGGTTTGATCTTATGGTCCTCTTTGCAACTGGCCTTGGCAATGTGAGAGACGTCATTCCTTTTCCAAGAACCTATGGCAAGGCCGACAATTAA 1887 0.4499 MPTTNQHTVSSPLPLLHAPRLPSLPYSDRVQLKALLAQPDFAAGQRVVVGGWVKSAKEEENPTAPNPSTRTDDAARDRRSKDVSCVEILQSRIPLIRNLWDVFGGSGHAQHKKRESALTVPNQTKAFPPKIARLLLTDGSCVQSLQVVVDSSVANPSRLMPTGTCLLVEGQLKRIEGKHDIELKAEKVHHIGTVDFDKYPLSKKRIPLDTLRDYSQFRPRTTTVATVMRIRSALSFATHTFFNEHAFIDVHVPTITTTDSEGFSNMFKVTTLDQNQKAEKEKLETIYENEGVRLEHVKAAVKEKSNIVEHLKRTESNREALAAAVQDLKKTNDLASQLEAREKKLGTSLKDDKVDSSKDFFPFQTYLTVSGRLHLESYACALGNVYSFGPRFLVDKTSSAKNAAEMWMVEVEMAFSQLEDSMKCANDFFKYLCNWVVNNCSEELKFVAKRIDNTCFDRLKGIRSDSSKMTYHEAIDLLRKSSSQTEDKKFETNFEPGLVLTSEHLSYLADVICKNPVIIYNYPKEAKPFYVRQNDDGTVAAFDLVVPKLGTIISGSQNEERLNMISSRIDELGLAREKYEWYLDLRRNGTVNNSGFTLRFDLMVLFATGLGNVRDVIPFPRTYGKADN 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01590 628 Pfam tRNA synthetases class II (D, K and N) 209 272 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Spst4g01590 628 SUPERFAMILY Class II aaRS and biotin synthetases 187 626 IPR045864 -
Spst4g01590 628 Pfam tRNA synthetases class II (D, K and N) 357 622 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Spst4g01590 628 CDD EcAsnRS_like_N 130 193 - -
Spst4g01590 628 PANTHER ASPARTYL/LYSYL-TRNA SYNTHETASE 33 625 - -
Spst4g01590 628 Coils Coil 311 341 - -
Spst4g01590 628 Gene3D Bira Bifunctional Protein; Domain 2 200 627 IPR045864 -
Spst4g01590 628 MobiDBLite consensus disorder prediction 56 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01590 Spst-Chr4 55240066 55245441 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01590 K01893 - gmx:100787363 939.873