Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01589 ATGTTTCCAGATTCGGGGATTCAAGTGACAATGGATGTCAAAACAAAAAGGAGAGCAGATGTAGATCATGATGAAGGAGAAGACCTAGTTCTAGCCACTCTGGTTGCCAATGGAGATGACATTAGTCCTCTAGTCAGGCATGCCTTTGAAATGGGGCGCCCACAGGGGCTCCTACGCCAGCTGGATTTTGTGGTGAAGAAAAAGGAAGCCGAAATTGAGGCAATGTGCAAGACACACTATGAGGAATTCATCCTTGCAGTTGATGAACTTCGTGGTGTGTTAGTTGATGCTGAAGAGCTCAAGAGTGAACTCCAAAGTGATAATTTTAAGTTGCAGCAGGTTGGCAGCGCCATTCTTGTCAAGCTTGAGGAGCTTTTTGAATCATATACAGTGAAGAAGAATGTGACTGAAGCTATAAAAATGTCAAAGAACTGTATGAAAGTTTTGGAGCTTTGTGTCAAGTGCAACAATCATATTTCTGAAGGCGAGTTTTATCCTGCATTGAAAACTGTTGATTTACTTGAGAGGTGTTACATAAACAATATTCCTGCCAAGTCTCTCAAAAGGGTGATAGAGAAAAGAATTCCCTCCATAAAATCACACGTCGAGAAGAAAGTATGCAGCCAAGTTAATGAATGGATGGTACAAATAAGAAGTTCTTGTAAATTAATTGGGCAAGCGGCAATTACTCGTACTGCATCAAAACGCCGGAGGGATAAGGAAATGCTGGAGAGGAAGAGAAAGTCTGACGGATTAAATGTTTCAGGAGTTGATGATCAGACTTATAATTTGGTGGTTGAAGAAGATGAAGATGTCGCCATGAAATTTGATCTCACACCTCTTTATCGCGCTTGTCATATTCATAGTTGCCTTGGGATCCTAAAGCAGTTTCATGAATATTACTATAAGAATAGATTGTTACAATTGAATTCGGATTTGGAGATATCTTCAATGCAACCTTTTATTGACTCGTATCAGACATTTTTGGCTCAAATTGCTGGGTACTTCATAGTGGAGGACAGGGTCCTGAGGACTGGTGGTGGGCTCCTAGAACCTGAACAGGTTGAAACTATGTGGGAAACTGCTTTAGCAAAAATAACACCAATGTTAGAGGTGCAATTCGCTCATATGAAATCTACCACCCATCTTCTCCTGGTTAAGGATTATGTTACACTTCTTGTGACTACTCTTACACAATATGGATATGACGTTGGCCAACTTCTTGAGGTGATTGATAATAGCCGTGACAAATTCCATAGGCTTCTTGTGGTAGAATGTCGGAAACAAACCATTGAGGTTCTTGGCAATGACACATATGAGCAGATGGTGATAAAAAAGGAAACTGATTATGAGAATAATGTTCTGTCATTTAATCTTCAAACATCAGATATTATGCCTGCTTTTCCATATGTTGCACCATTCTCCTCGATGGTACCTGATGCTTGTCGCATTGTGACATACTTCATCAAAGGCTCTGTTGATTTCTTGTCGTATGGTCTACGTTCCAATTTCTTTAATGATGTGAGGAATTATTTGGACAAGTTCCTGATTGAAATATTAAATGAATCTTTGCTTGATACAATCAATAGCGGAGGTATCAGTGTGTCTCAGGCCATGCAGCTTGCAGCAAACATAACCGTTCTTGAAAGAGCTTGTGACTTTTTCCTTCAGCATGCAGCTCATCTGTGTTGCTTGCGATCAGCTTATAAGCCCCAAGCTACTTTGACTGCAAAGATATTACTGAAAACTTCGAGGGATGCAGCTTATATGAGTCTGCTGAGTTTGGTAAATGCAAAATTAGATGAGTATATGAATCTTGTAGAAAGTGTCAACTGGACTACTGAGGAGGAAAAGATAACTGGGAATGAATACATAAATGAAGTGATCTTTTACCTTGATTCACTTATGTCCACAGCACAACAAATTTTACCTCTAGATGCCATGTACAAGGTTGGGACTAGTGCACTTGAGCATATTTCCAACACAATTGTGGGAGCTTTCCTTAGTGATAATGTCAAAAGGTTTAATGCAAATGCAGTTATGAATATCAACAATGATCTTAAGATGTTAGAGACTTTTGCAGATGACAGGTTTTATTCTTCCGATTTGGCTGAAATTTATGCAGGAGGTGATTTTAAGAGCTGTATGATAGAAGCACGACAGTTAATCAATCTTCTCTCAAGTAGTCAGCCTGAGAACTTCATGAATCCTGTCATAAGGGAGAAAAATTACTATGCACTGGATTATAAAAGCGTAGGATCCATTTGTGATAAATTCAAGGATTCTGCAGATGGAATCTTTGGAAGTCTTTCAAATAAAAACACAAAGCAAACTGCTAAAAGGAAATCAATGGACATGCTCAAAAAGAGACTTAAGGATTTCAATTGA 2388 0.3907 MFPDSGIQVTMDVKTKRRADVDHDEGEDLVLATLVANGDDISPLVRHAFEMGRPQGLLRQLDFVVKKKEAEIEAMCKTHYEEFILAVDELRGVLVDAEELKSELQSDNFKLQQVGSAILVKLEELFESYTVKKNVTEAIKMSKNCMKVLELCVKCNNHISEGEFYPALKTVDLLERCYINNIPAKSLKRVIEKRIPSIKSHVEKKVCSQVNEWMVQIRSSCKLIGQAAITRTASKRRRDKEMLERKRKSDGLNVSGVDDQTYNLVVEEDEDVAMKFDLTPLYRACHIHSCLGILKQFHEYYYKNRLLQLNSDLEISSMQPFIDSYQTFLAQIAGYFIVEDRVLRTGGGLLEPEQVETMWETALAKITPMLEVQFAHMKSTTHLLLVKDYVTLLVTTLTQYGYDVGQLLEVIDNSRDKFHRLLVVECRKQTIEVLGNDTYEQMVIKKETDYENNVLSFNLQTSDIMPAFPYVAPFSSMVPDACRIVTYFIKGSVDFLSYGLRSNFFNDVRNYLDKFLIEILNESLLDTINSGGISVSQAMQLAANITVLERACDFFLQHAAHLCCLRSAYKPQATLTAKILLKTSRDAAYMSLLSLVNAKLDEYMNLVESVNWTTEEEKITGNEYINEVIFYLDSLMSTAQQILPLDAMYKVGTSALEHISNTIVGAFLSDNVKRFNANAVMNINNDLKMLETFADDRFYSSDLAEIYAGGDFKSCMIEARQLINLLSSSQPENFMNPVIREKNYYALDYKSVGSICDKFKDSADGIFGSLSNKNTKQTAKRKSMDMLKKRLKDFN 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01589 795 Coils Coil 87 107 - -
Spst4g01589 795 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 584 734 IPR042044 -
Spst4g01589 795 PANTHER SEC15 22 793 IPR007225 GO:0006886|GO:0090522
Spst4g01589 795 FunFam Exocyst complex component 584 734 - -
Spst4g01589 795 Pfam Exocyst complex subunit Sec15-like 450 759 IPR046361 -
Spst4g01589 795 FunFam Exocyst complex component 404 570 - -
Spst4g01589 795 Gene3D - 404 570 IPR042045 -
Spst4g01589 795 PIRSF Sec15 7 795 IPR007225 GO:0006886|GO:0090522
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01589 Spst-Chr4 55235972 55238359 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01589 K19985 - gmx:100796988 1335.09