Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01587 ATGATTCGAGCTGTAAATAAATTTAAGGCAGATTTTGGTGGACAAGTTGTTGCTTTGGAGAGGGTGCAACCTTCATCAGATCATGTTCCTCATAGGTATTTGTTGGCAGAGGCAGGAGACACTTTATTTGCTTCCTTTATAGGAACAAAGCAGTACAAGGATGTAATTGCTGATGCTAATATACTTCAAGGTGCCATCTTTCATGATGATGCTGTTGAGGAATCTGACAAGAATGCATCAACTGAATCTGACAATGATGAAAACCAAAATGGAAAAGACTACATGTGGAATCCTCTACAGCCGAGGTCTAATAAACCAAAGAAGAAATACAAACCTGCAGCTCATAGGGGTTTCATGGCTCGTGCTAAAGGAATACCTGCTTTAGAATTATACAGGCTTGCTCAAAAGAAGAAACGCAAGCTTGTTCTATGTGGCCATTCACTTGGTGGAGCAGTAGCTGTATTAGCTACTCTTGCCATTTTGAGAGTAATTGCTACTTCATCTTCATCAAAGGAAAATGAAAATGTTTCTATCAAATGTATTACATTTTCTCAACCTCCTGTTGGAAATGCTGCTTTGAAGGATTATGTTAATAGAAAAGGTTGGCAGCATTATTTTAAGAGTTACTGCATTCCGGAAGATTTGGTTCCCCGTATTTTATCTCCTGCTTATTTTCACCATTATAATGCTCAAATTCAGCCAGGGCCTTCTGAAAATGAAACTGACAGCTCATTATTGAGAAAGCATGAGCAAGGGGTGGGGAAGCCAAAAGAGAAGGATGCAGAGCAATTGGTTTTGGGGGTTGGGCCTGTGCAGAGATCATTCTGGAGACTCTCAAGGCTAGTTCCTTTGGAAGGTCTCCGGAGACAATTTATTACACGCAGGGAAAGACGGATCAGTTCTGTTGTTAAAAATTCATTGCCTGATTCTCTTGCTAATACTTTGATTGAGGAGGAAGTAGTTGCACCGCAGTCGCTTGAAATACAAGAAGGGTCTGATGGCATATCACTCAAGCCTTTACCTGAAGCTGATAAACATTCATTAGAGCTTCCAACTAATGGGAAAACAGATACAAAGAACAATTTAATGACTGGAGATGAGAAAAAGTGGCGCAGAGTGCCTTATTTGCCTTCCTATGTGCCATTTGGACAGCTTTATTTATTGGGAAATTCCTCTGTAGAGTCTCTATCAGGTGCAGAGTACTCAAAGTTGACATCGGTCAGATCTGTGATTGCTGAATTGAGGGAAAGATTTCAATCACATTCAATGAAATCATATCGATCTCGATTTCAGCGAATCTATGACCTTTATATGAGTGATGATTCCTCTTCTTTCTCTGGGATTGATCAGTTTCCTCATCTGAAGCAATGGCTCGGGTTTGCAGCTGCTGGCACTGTGGAGCTTGGTCACATAGTTGAGTCTCCTGTTATTCGAACTGCAACCTCAATTGTTCCTTTGGGATGGAATGATGGACTAGGAGGGAAAAATGGAGAACCTCTGAAAGTTGATATTACTGGTTTTGGGTTGCATTTATGTACACTCGTTCATGCTCAAGTGAATGGTAACTGGTGTTCTACTACAGTTGAAATGTTTCCTTCTCCACCAAACTATTCTTCAAATCAAGGAATCCAGCCAGAGTTACAGAGGTTGAGAATATTAGTTGGTCCTCCGCTAAGAAGTCCACCAAAGCATCAAACTGTTTTAGACTCATTGATGCCTGCTTTTACTTCTGTTGACTCTGAGACTGCAAGTAGTTCAGCACCTGTTGACGAGGATAAATTCATCCGTCCAGAAAGTTTAAATAACTTTGTAATATTTTGCACCAGTGATTTTACAACTGTTTCCAAAGAAGTTCATGTCAGAACCCGCAGAGTACGATTAGTTGGGCTGGAGGGAGCTGGTAAAACTACACTTTTAAAGGCTATATTGAATAAATGTAAACAAAATACTGTCGCCAATGAGGATGCAGTTTCAGAGGTTGTGCGAGAAGTTATTGCTGATGGTTTATGCTATTGTGACTCCGATGGAATAAATATGCAGGAACTAAATGTAGAAACTTCTCGCTTCAGGGATGAACTATGGCTTGGAATACGAGATATAAGTCAGAAGACAGATTTGATTGTTTTTGTTCATAACTTATCTCATAGCATACCTCGATGTAGTAATTCAAATGATAATCAACAGAGGCCAGTCCTGTCACTTTTCTTGGATGAAGCTAAATCTCTTGGAATTCCTTGGGTTCTTGCAATCACAAATAAATTTGCAGTTAGTGCACACCATCAAAAGGCAGCAATTGATGCTGCTTTGCAAGCATACCGAGCATCACCTAGCTCAGCTGAAGTTGTAAATTCTTGTGCATATGTTATGCCCGGATTTATTGGAGCTTCTATTTCTTTGGATGCATCTAATACAAGTTCTTCTAGAAGGATGGGTGCTGAAAAGCTTATATTTGCTCCTTTTAACTTCATTAGGAAGCCTTTCCTTAAAAGGGAGATTGTGTTTCCAGTAGAAGGAGTAAATTCTCTGTGTCAGCAAATTCACCATATACTCCGAAGTCGTGAGGAGTCTTCTTTTCAGGAATTTGCAAGAGATAGGCTTATGATGGAGTTGGCACGAGAAGAAGCAATGTCAATTGAAGCAAGTAGAGATGCCCGAGCTAAGGCAAATTCATTGAATTCTGCTGCCGTGGGGGCATCTGTTGGTGCTGGTCTTGGTCTTGTCCTAGCAATTGTAATGGGTGCAGCATCTGCCCTGAGGAAGCCCTAA 2766 0.4056 MIRAVNKFKADFGGQVVALERVQPSSDHVPHRYLLAEAGDTLFASFIGTKQYKDVIADANILQGAIFHDDAVEESDKNASTESDNDENQNGKDYMWNPLQPRSNKPKKKYKPAAHRGFMARAKGIPALELYRLAQKKKRKLVLCGHSLGGAVAVLATLAILRVIATSSSSKENENVSIKCITFSQPPVGNAALKDYVNRKGWQHYFKSYCIPEDLVPRILSPAYFHHYNAQIQPGPSENETDSSLLRKHEQGVGKPKEKDAEQLVLGVGPVQRSFWRLSRLVPLEGLRRQFITRRERRISSVVKNSLPDSLANTLIEEEVVAPQSLEIQEGSDGISLKPLPEADKHSLELPTNGKTDTKNNLMTGDEKKWRRVPYLPSYVPFGQLYLLGNSSVESLSGAEYSKLTSVRSVIAELRERFQSHSMKSYRSRFQRIYDLYMSDDSSSFSGIDQFPHLKQWLGFAAAGTVELGHIVESPVIRTATSIVPLGWNDGLGGKNGEPLKVDITGFGLHLCTLVHAQVNGNWCSTTVEMFPSPPNYSSNQGIQPELQRLRILVGPPLRSPPKHQTVLDSLMPAFTSVDSETASSSAPVDEDKFIRPESLNNFVIFCTSDFTTVSKEVHVRTRRVRLVGLEGAGKTTLLKAILNKCKQNTVANEDAVSEVVREVIADGLCYCDSDGINMQELNVETSRFRDELWLGIRDISQKTDLIVFVHNLSHSIPRCSNSNDNQQRPVLSLFLDEAKSLGIPWVLAITNKFAVSAHHQKAAIDAALQAYRASPSSAEVVNSCAYVMPGFIGASISLDASNTSSSRRMGAEKLIFAPFNFIRKPFLKREIVFPVEGVNSLCQQIHHILRSREESSFQEFARDRLMMELAREEAMSIEASRDARAKANSLNSAAVGASVGAGLGLVLAIVMGAASALRKP 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01587 921 MobiDBLite consensus disorder prediction 73 110 - -
Spst4g01587 921 MobiDBLite consensus disorder prediction 73 89 - -
Spst4g01587 921 CDD Ras_like_GTPase 627 773 - -
Spst4g01587 921 PANTHER F21O3.11 PROTEIN 1 921 - -
Spst4g01587 921 MobiDBLite consensus disorder prediction 242 261 - -
Spst4g01587 921 Gene3D - 624 783 IPR027417 -
Spst4g01587 921 Pfam Lipase (class 3) 93 219 IPR002921 GO:0006629
Spst4g01587 921 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 616 768 IPR027417 -
Spst4g01587 921 MobiDBLite consensus disorder prediction 231 261 - -
Spst4g01587 921 Gene3D alpha/beta hydrolase 6 261 IPR029058 -
Spst4g01587 921 SUPERFAMILY alpha/beta-Hydrolases 13 231 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01587 Spst-Chr4 55222783 55232780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01587 1 921 Acyl Lipid Metabolism Gene Families AT3G07400 60.786 0.0 1109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01587 - - gmx:100797525 1640.94