Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01581 ATGTCTGGCGAAGAGGAAGAAAACGCCGCAGAGCTCAAAATTGGAGACGAGTTTTTGAAGGCAAAATGCTTAATGAACTGTGAAGTTTCTTTGATTCTTGAGCACAAGTATGAGCAACTTCAACAGACATCTGATGATCCAATGAATCAAGTTTCTCAGGTATTTGAAAAGTCGTTGCAGTATGTGAAGCGATTCAGCCGCTATAAAAACCCAGATGCTGTTAGACAAGTTCGAGAAATTCTTGCAAGATATCAATTGGCTGAGTTTGAGTTGTGTGTCCTAGGCAACCTTTGCCCGGAAACTGTGGAGGAAGCCATTGCTATGGTTCCATCTATCAAGACAAGAGGACGGGCTCAGGATGATGAAGCAATTGAGAAAATGTTGAACGACTTGTCATTGATTAAGAAGTTTGAATAG 417 0.4125 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01581 138 Gene3D - 2 138 IPR038324 -
Spst4g01581 138 PANTHER DNA-DIRECTED RNA POLYMERASE II 4 138 IPR045222 -
Spst4g01581 138 SUPERFAMILY HRDC-like 3 136 IPR010997 GO:0000166|GO:0044237
Spst4g01581 138 SMART rpol4neu2 16 138 IPR006590 -
Spst4g01581 138 Pfam RNA polymerase Rpb4 23 132 IPR005574 GO:0006352|GO:0030880
Spst4g01581 138 FunFam Dna-directed rna polymerase ii subunit 4 2 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01581 Spst-Chr4 55157885 55160747 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01581 K03012 - gmx:100527316 271.937