Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01535 ATGCTGAGTCAGGTGGCATCTGATTTGGCAACGTCAAATTTGGAGAAATTGATAAATGCAACACTTGAACAATCACGTTATATTTGTTGCTTCACAAGCATTACTGAGGACTTTGAAAAGGAAAAGAAAAAATTGATAGCAAAAAGGACAACTTTGGGTGAGCATGTTAAAGTGGCAAATAGAAGAAATGAAAACATAAGAAGTGATGTCGCGTCTTGGCAAGAGCAAGTTGATGAACTTATGAAAGAAGACACCAAAACAAAAGTCAGATGCTTTTTTGGATGGTGTCCTAATTGCAAATGGCAATATAGTAGGGGGAAGGATTTGGAAAGCAAGACTGAAGAGATTAAAAGACTCATGGAATGCAACTTGGAAAATGTTGGAATCCCTCGTGATGTTCCAGAAATTGAATATCATTCTTCTCAAAATTACATTTCTTTCAACAGTAGAAAGTCGGCCTATGAGAAACTTTGGAATGCATTGACAGATGAAAACAACTATATAATTGGATTGCAAGGGATGGGGGGCACAGGTAAAACAGCATTAGCAAGAGAAATGGGTAAGGAGCTTAAGAAAACAAAAATGTTTGATACAGTTGTTGATACTACAGTGTCTAATACCCCTGATACAAAAAGGATTCAAGATGATATTGCAGGGCCATTAGGGTTGCCATTGAAGGATTGTACTGAATCAGAAAGACCTAGAAAGTTGTGGGACAGATTGAAAAATGGTGAGAAAATTCTTGTCATTCTTGATGATGTGTGGGAATATATCAGTTTTGAAGAAATAGGTATTCCACCTAAGGACAACCACAACGGTTGTAGAATTCTTGTAACCACTCGCAATATGAGCATATGCAACAGAATGGACTGTGACAAGACAATTGAACTAAATGTCTTACCTGACGAAGAAGGATGGATCTTGTTCCAAAAGCATGCCGGTTTGAGTGATAGTTCTTCTAAAATTCTTATCGATAAAGGTCGTAAAATTTCCAAAGAATGTAAAGGCTTACCAATTGCAATTGAAGTTATCGCTAGTAGTTTGAAGCGCCAACAACATTTGGAAGAATGGAATGTAGCCTTAAAAGCCTTGCGAAAGTCCATGCCCCTACATGGCGATGATGATAATTGGGGTAAAGTTTTTACATGTTTGAAGTATAGTTATGACAATATGAAGAATAAAACAGCTAAGGAATTGTTCCTTTTGTGTTCTATGTTCCAAGAAGATGAAGAATTTGATGAAGAAACTTTAGTCAGACTTGCCATAGGAGCGGGCCTCATTGAGAAAATTGAAGATGATGATTACATTCATGTTTATTATTGA 1323 0.3673 MLSQVASDLATSNLEKLINATLEQSRYICCFTSITEDFEKEKKKLIAKRTTLGEHVKVANRRNENIRSDVASWQEQVDELMKEDTKTKVRCFFGWCPNCKWQYSRGKDLESKTEEIKRLMECNLENVGIPRDVPEIEYHSSQNYISFNSRKSAYEKLWNALTDENNYIIGLQGMGGTGKTALAREMGKELKKTKMFDTVVDTTVSNTPDTKRIQDDIAGPLGLPLKDCTESERPRKLWDRLKNGEKILVILDDVWEYISFEEIGIPPKDNHNGCRILVTTRNMSICNRMDCDKTIELNVLPDEEGWILFQKHAGLSDSSSKILIDKGRKISKECKGLPIAIEVIASSLKRQQHLEEWNVALKALRKSMPLHGDDDNWGKVFTCLKYSYDNMKNKTAKELFLLCSMFQEDEEFDEETLVRLAIGAGLIEKIEDDDYIHVYY 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01535 440 Coils Coil 56 83 - -
Spst4g01535 440 Gene3D - 299 392 IPR042197 -
Spst4g01535 440 FunFam Probable disease resistance protein At1g61300 130 294 - -
Spst4g01535 440 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 30 431 - -
Spst4g01535 440 PRINTS Disease resistance protein signature 241 255 - -
Spst4g01535 440 PRINTS Disease resistance protein signature 334 348 - -
Spst4g01535 440 PRINTS Disease resistance protein signature 168 183 - -
Spst4g01535 440 Pfam NB-ARC domain 152 390 IPR002182 GO:0043531
Spst4g01535 440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 403 IPR027417 -
Spst4g01535 440 Gene3D - 110 296 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01535 Spst-Chr4 54347123 54348445 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01535 - - pvu:PHAVU_010G025100g 676.011