Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01531 ATGGGTCTTGGGGAAGATGTCAACAGAGAAGGCATTAGAAAGACACCACTTCGTGTTGCCAAGGCCCTTTCTGAAGGAACTAGAGACTTTTTTGAAGAATGTGTTAGCAAAAATATTGATAAGAAGGGTCTTGTTATACCAGGCTATATTCAAAGTGTGAAGGAAATTGTGGAAGGTGCATTATTCCCTGAAGAAGGTCTAGACAAAGACGAGGTTGGTCATGCAGGTGGAGTTGGAGGACTTGTGATTGTAAGAGATCTTGACTTTTATTCCTATTGTGAGTCTTGCATGCTACCATTCTATTTCAAGTGTCATGTGGGTTATGTCCCTTCTGGCCAAAGAGTTTTGGGTTTAAGCAAGCTCTCTCGTGTCACCAATGTGTTTGCAAAGCGACTCCAAGAGCCTCAACGACTTGCAAATGAGGTGTGTTCTGCTTTGCATGAAGGGATACAACCCACTGGGGTTGCTATCGTACTTGAATGCAAGCACGTACACTTTCCAGACACGGAATCAAACTCATTTGACTCAAACCACAAAGGGGTGGTGGGGATACTGGTTTCTTCAGGGTCTGGTGCTTTTGAAGACAAAGATGCAGACATGTGGGGTGACTTTTTTGGCCTCATTAAGTTTAGAGGTATTGACAAGGATAACATTCATGATAAGGGGTCGGTGGACCAATGTTGGTGTCCTTCTTTGTCTAATAATGTTTCACTCAAGAATGAAGAAATCAAGCCTACTATGGTCACTGCAGTAGCTTCAATTCTCAAGTCTTTAGGTGAGGATCCAACCAGGAAGGAATTAGAAGGGACTCCTGGTAGATATACGAAATGGCTGATGAACTTTCAATGCAGTAGCATTGATATGAGGCAGAATGGTTCCCTTTGGAGTGGGATATATGATGCTTTGGACCCTAACGAGGAGGAAGGCTTTAATGTCAAGCTACACTCAGAGCTGAACTTGCCCCTTTTGTCACAATGTGAGCATCATTTACTTCCATTTCATGGTGTTGCTCACATAGGATACTTCATTTCCAAAGGGTTTCACCCCATTGGAAAAAGCTTTGTGCAGTCTATAGTGCATTTTTATGGTTTTAAGCTCCAGGTTCAGGAAAGGCTCACCAAGCAGATTGCAGAAACCATCTCTTCACTGGTAGGTAAAAATGTGATTGTGGTGGTGGAAGCAAGTCACACTTGTATGATTTCAAGGGGCATTGAGAAGTTTGGTAGTAACACAGCTACCATTGCTGCATTGGGATGCTTTTCAACTGACCTTGCTGCAAGAGCTGCGTTCCTCGAGAGTATTCCAGGGCCTAAATCTCTTTAA 1323 0.4316 MGLGEDVNREGIRKTPLRVAKALSEGTRDFFEECVSKNIDKKGLVIPGYIQSVKEIVEGALFPEEGLDKDEVGHAGGVGGLVIVRDLDFYSYCESCMLPFYFKCHVGYVPSGQRVLGLSKLSRVTNVFAKRLQEPQRLANEVCSALHEGIQPTGVAIVLECKHVHFPDTESNSFDSNHKGVVGILVSSGSGAFEDKDADMWGDFFGLIKFRGIDKDNIHDKGSVDQCWCPSLSNNVSLKNEEIKPTMVTAVASILKSLGEDPTRKELEGTPGRYTKWLMNFQCSSIDMRQNGSLWSGIYDALDPNEEEGFNVKLHSELNLPLLSQCEHHLLPFHGVAHIGYFISKGFHPIGKSFVQSIVHFYGFKLQVQERLTKQIAETISSLVGKNVIVVVEASHTCMISRGIEKFGSNTATIAALGCFSTDLAARAAFLESIPGPKSL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01531 440 Gene3D - 75 211 IPR043133 -
Spst4g01531 440 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 230 435 - -
Spst4g01531 440 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 3 209 - -
Spst4g01531 440 FunFam GTP cyclohydrolase 1 76 211 - -
Spst4g01531 440 Gene3D - 236 287 IPR043134 -
Spst4g01531 440 Gene3D - 306 435 IPR043133 -
Spst4g01531 440 Pfam GTP cyclohydrolase I 3 164 IPR020602 -
Spst4g01531 440 Pfam GTP cyclohydrolase I 249 434 IPR020602 -
Spst4g01531 440 Gene3D - 1 33 IPR043134 -
Spst4g01531 440 PANTHER GTP CYCLOHYDROLASE I 2 164 IPR001474 GO:0003934|GO:0046654
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01531 Spst-Chr4 54274026 54275578 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01531 K01495 - gmx:100792313 621.698