Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01524 ATGGGAACAAAGAGGGACAGTTCCCCGGTGAATGTTTTGTTTGAAAGGTTGAGGAAGCTACCAATGAAAGTGAAGATCTTTTCTGGGGCATTGCTTGCTGTTTCTGCTCTGGTGGCCTTGAAGCTCACTATCACCAATAACTACTATTACTTCATAGCCGCTGAAACAATCCATGTTGCTGGAATAATCGCCCTCATTTACAAGCTTTTTGCCCTCAAGACATGCTCTGGTTTATCTCTCAAGACTCAAGAGCTGACAGCTATATTTGTAGCAGCAAGATTGAGTTGTAGCACCATGACAGAAGCTAACATACATACTGTGCTAGATCTCATATCTCTTCTTTCAACATTAGTGGTCATATGGATGATAAGATTCAGGTTAAAATCATCCTATATCAAGGAGCTAGACAATTCGCGACTATACTTTGTGGTGGTCCCTTCTGCAATCCTTGCTATACTAATCCACCCTTATACACACCATTGGCGTTTAATTCGAATAGTTTGGGCATTCAGTTTGTATTTGGAAGCTGTTTCCGTTCTTCCTCAACTTCGTTTTATGCAGAACGCAAAGATGGTTGAAACATTTACAGGGTACTATGTATTCGCTCTGGGAGTTTCAAGATTCATGGCTCTGGCTTATTGGATAATTCAGATCTATGAGACTGGAGGGACATATCTATTTCTGGCTGGGAGTGGGTATTTTTGGTTCTTGGCAGCTTTTGTGGCTGAGATGGTTCAATCCTTCATCTTGGCTGACTTTTGTTACTATTACATGAAGAGCTTCGTGCAAGGGCAACTTTTGAGGAAAATGCCAGTTTAA 819 0.4127 MGTKRDSSPVNVLFERLRKLPMKVKIFSGALLAVSALVALKLTITNNYYYFIAAETIHVAGIIALIYKLFALKTCSGLSLKTQELTAIFVAARLSCSTMTEANIHTVLDLISLLSTLVVIWMIRFRLKSSYIKELDNSRLYFVVVPSAILAILIHPYTHHWRLIRIVWAFSLYLEAVSVLPQLRFMQNAKMVETFTGYYVFALGVSRFMALAYWIIQIYETGGTYLFLAGSGYFWFLAAFVAEMVQSFILADFCYYYMKSFVQGQLLRKMPV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01524 272 Pfam ER lumen protein retaining receptor 74 217 IPR000133 GO:0006621|GO:0016020|GO:0046923
Spst4g01524 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 50 260 IPR000133 GO:0006621|GO:0016020|GO:0046923
Spst4g01524 272 PRINTS ER lumen protein retaining receptor signature 190 204 IPR000133 GO:0006621|GO:0016020|GO:0046923
Spst4g01524 272 PRINTS ER lumen protein retaining receptor signature 50 69 IPR000133 GO:0006621|GO:0016020|GO:0046923
Spst4g01524 272 PRINTS ER lumen protein retaining receptor signature 168 188 IPR000133 GO:0006621|GO:0016020|GO:0046923
Spst4g01524 272 PRINTS ER lumen protein retaining receptor signature 77 97 IPR000133 GO:0006621|GO:0016020|GO:0046923
Spst4g01524 272 PRINTS ER lumen protein retaining receptor signature 204 222 IPR000133 GO:0006621|GO:0016020|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01524 Spst-Chr4 54148755 54153478 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01524 1 272 Miscellaneous Gene Families AT3G25160 59.559 6.52e-114 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01524 - K10949 gmx:100790733 472.626