Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01523 ATGGGGGCAAAGAGTGGCAATTCTCCAGCGAATGTTTTGTTTGAAAGGTTGAGGAAGCTGCCAATGAAAGTGATGATCTTTTTGGGGGTGTTGCTTGCTGTAATTGTTTTGGTGGTCTTAAAACTCACCATTAGAAGACGCTACCATTTCTTCTTAGTCTCTGAAGTAATCCACTCTGTGGGGATACTTGCCCTCACATATAAGCTTTTCGCCCTGAAAACCTGCTCTGGTTTATCACTTATTACCCAAGAGCTCACAGCTTTATTCCTAGCAGCAAGATTAGTTAGTAGCAAAGACTTTCTATATAGCCTCCAATCTGCTCTAGATTTCATATCTCTTTGTTTAACATTGGTGGTCATATGGATGATAAGATTCAAGTTGAAGGCATCCTATATCAAGGAGCTTGACAATATGAAACTATACTTTGTGGTGGTGCCTTCTGCAATCCTTGCAGTACTAGTCCACCCTTTTTCAACTCAGTGGAGTATTACTCGAGTTGCTATCGCATTCAGCATTTATCTGGAAGCTGTTTCTGTTCTCCCTCAGCTTCGTTTCATGCAGAATGCGAAGGTTGCTTCTCTAGGCTCTGTTCAAATGATTGAAACATTCACAGGATATTATGTATTTGCTCTTGGTGTTTCAAGATTCATGGCATTGGCTCATTGGATAATTCAGATTTATGACACTCGAGGGGCATTTCTATTTTTGGCTGGAAGTGGCTATTTCTGGTTCTTGGCAGCTTTTGTTGCAGAAATATTGATAAAAACGGAAGTCCACAAGGTGGAAGTAACGACAGCTAGAAAAATTCTGGCAGAGTGTCACAGCCACGTCGTGGTCGCGTATCTGCCACCTTCAACCACGTAG 864 0.4178 MGAKSGNSPANVLFERLRKLPMKVMIFLGVLLAVIVLVVLKLTIRRRYHFFLVSEVIHSVGILALTYKLFALKTCSGLSLITQELTALFLAARLVSSKDFLYSLQSALDFISLCLTLVVIWMIRFKLKASYIKELDNMKLYFVVVPSAILAVLVHPFSTQWSITRVAIAFSIYLEAVSVLPQLRFMQNAKVASLGSVQMIETFTGYYVFALGVSRFMALAHWIIQIYDTRGAFLFLAGSGYFWFLAAFVAEILIKTEVHKVEVTTARKILAECHSHVVVAYLPPSTT 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01523 287 PRINTS ER lumen protein retaining receptor signature 212 230 IPR000133 GO:0006621|GO:0016020|GO:0046923
Spst4g01523 287 PRINTS ER lumen protein retaining receptor signature 198 212 IPR000133 GO:0006621|GO:0016020|GO:0046923
Spst4g01523 287 PRINTS ER lumen protein retaining receptor signature 50 69 IPR000133 GO:0006621|GO:0016020|GO:0046923
Spst4g01523 287 PRINTS ER lumen protein retaining receptor signature 77 97 IPR000133 GO:0006621|GO:0016020|GO:0046923
Spst4g01523 287 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 50 252 IPR000133 GO:0006621|GO:0016020|GO:0046923
Spst4g01523 287 Pfam ER lumen protein retaining receptor 74 225 IPR000133 GO:0006621|GO:0016020|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01523 Spst-Chr4 54142852 54146326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01523 1 253 Miscellaneous Gene Families AT3G25160 53.360 4.39e-88 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01523 - K10949 gmx:100790210 349.362