LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst4g01521	ATGGTTGAAGTTGAAGAGGTGGAGCTGGATTTGGCGTTGTCCATCGGAGGGAGTTTCGGGAAGCACACGGTGGAGAACCCCGCACCTGATTCCAAGCCCGAAACGCTTGCATCGGATTCGTTTACGCGGGTGGCCGTCGAACCGCACCACAAGCGTGAGATTCAAGCGTTGCGGAGGATGGAGGCGAAGAAGAAGCGAGAGCAGAAGAGGGAGCGCGTCGTCAGAGAACCCGAACCTCAACCTGAACCCGAACCCGAGTGGGAACAGGCTTTTAAGAAGGAGAAAACGGAATGCCGGAACGGCGTTAGTGCCTCTGGCCCGTGGGGAACGGCGGAACCGTTTCGCATGCACCAGTTTCCGACGGCGCAGTACTTCCCGTCGAATAACGGCTTTCCGGTACCCTGCTGGTTCGGAAGCCAGAAGAATGCAGGTGGCGTTGACGGTGTTAACTGCTGTGATAAGATGGTAACGAAGTCTAATGGGTCTTCTAGGTGCAGTTCTTCTGCGGTTTCGGATTACCAAAGCTCTTCTCGTGAAGATGGGGGAAGCACTGATAGCCACAGTCATTCAGTTCATTCTTTGGCAGAACCACCCCATTTGACAAGTTCCAAGGAAAAAAGCATAGCAATCCAACCTGAAGAAAGTGGTTCTGCCTCATCTCACCCCATGAAACCCAAACAAGGCAACAACTTTCAAGAGAGAAAGCACATTGCAAAGGAATCTCAATCAAAACCAAACCCCACTTCACCTGAGCATATGAAACTCAATCAAGGACCACCTCCCACAAGCCACAATGCACTTCCAACAATGCCAGCTGAGAAGCCTCTGTGCAAAGAAAAGCCAAGCCCCTTGGTGGAGACCAAAGGTGAGAAGGCAAAACCCCCAAAGCCTCTCTGTCTCACCACTTCACTCCCTGAAATGCCATACGTGTCCACAAAAGGGAAAAATGGGAAAATTGTTAATGGGTTCCTATACAGATATAACAAATCTGAGGTTAGCATTGTTTGTGTCTGCCATGGAAGCACATTTTCTCCTGCAGAGTTTGTGCAGCATGCAGGGGGCACAGACATCACGCACCCTCTGAAGCATATCACAGTAATTCCTTCTGCCTTAAGGTGA	1119	0.5076	MVEVEEVELDLALSIGGSFGKHTVENPAPDSKPETLASDSFTRVAVEPHHKREIQALRRMEAKKKREQKRERVVREPEPQPEPEPEWEQAFKKEKTECRNGVSASGPWGTAEPFRMHQFPTAQYFPSNNGFPVPCWFGSQKNAGGVDGVNCCDKMVTKSNGSSRCSSSAVSDYQSSSREDGGSTDSHSHSVHSLAEPPHLTSSKEKSIAIQPEESGSASSHPMKPKQGNNFQERKHIAKESQSKPNPTSPEHMKLNQGPPPTSHNALPTMPAEKPLCKEKPSPLVETKGEKAKPPKPLCLTTSLPEMPYVSTKGKNGKIVNGFLYRYNKSEVSIVCVCHGSTFSPAEFVQHAGGTDITHPLKHITVIPSALR	372

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst4g01521	372	PANTHER	AFP HOMOLOG 2	4	370	IPR031307	GO:0007165
	Spst4g01521	372	MobiDBLite	consensus disorder prediction	59	106	-	-
	Spst4g01521	372	MobiDBLite	consensus disorder prediction	16	38	-	-
	Spst4g01521	372	MobiDBLite	consensus disorder prediction	242	263	-	-
	Spst4g01521	372	MobiDBLite	consensus disorder prediction	147	299	-	-
	Spst4g01521	372	Pfam	Tify domain binding domain	332	365	IPR032308	-
	Spst4g01521	372	MobiDBLite	consensus disorder prediction	59	99	-	-
	Spst4g01521	372	MobiDBLite	consensus disorder prediction	155	197	-	-
	Spst4g01521	372	Pfam	Ethylene-responsive binding factor-associated repression	3	31	IPR012463	-
	Spst4g01521	372	MobiDBLite	consensus disorder prediction	279	293	-	-
	Spst4g01521	372	Coils	Coil	50	70	-	-
	Spst4g01521	372	MobiDBLite	consensus disorder prediction	204	227	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst4g01521	Spst-Chr4	54139701	54141986	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst4g01521	-		-	gmx:100809595	407.912