Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01520 ATGAAGTGGCAGGCAGCCATAAAAGTGGACAAGAAACAGATCCATTTAGGGACAGTTGAGTCTCAAGAAGAAGCTGCGCACTTATATGACAGGGCTGCTTTCATGTGTGGGAGAGAGCCCAATTTTGAGCTTCAAGAAGAGGAGAAAATGGAATTGTGTAAATTAAAATGGGAAGATTTCTTAGTAATGACTAGACAAGCAATTAACAGCAAAAAACAAAAGAGAAAACATAGTTCAGAAGGTAAAGATACTAAGCTGGAACTTTCAAAGCATTCAGATAATAAGCAAGGAAAATACATGGGTTCGGGTAAGGAAGAAGCCTCAGATGGAGGACTGGATTCGCCTTCTTCCTCTTCTTCTTCTTCTTCTTCTCATGCTTGGAAAAGTAGAATCATTATTCCAACCCTACTAGCAGGGGTGGCTGGAGCTGGAACTGGGTTAATTTCAAAGCATCGAAAAACTCTTGGTCTTGCTAATGTGTGTTCTAGCTATGCTGCAAATTTCGCCATCATCACAGGGTGCTATTGTGGGGCACGTGAATTTGTGGCTGCAACTAGAGATACAGGACCTGATGACATATGGAACTCTCCATTAGCTGGATTTGGAACTGGTGCTCTTCTAGGGCGTCTGCAAGGTGGTCAACTTGGTGCAATCCGGTACTCTCTGGCCTTTGCTGTTGTCGGGACAGCAGCAGATTTTACTTTTTTAAAATTGAAAGATGCTTTGAGAGATCACGCCAAAACAATATACCAAGACATTGAGAATTCAAAGAAGAGTGGAACTTGGTTAAAATTACCACAATGGTTCCCAATTCAAGTACTCGACGAGGAAGCCCTTGCTGCTAAACGTGCTCAGGAAGAGCAGTTCCTTCAGCAGAGGGCTAGGATTCGCAGCCTTAAGAAAGAAGAAGAATCGTGA 918 0.4281 MKWQAAIKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELQEEEKMELCKLKWEDFLVMTRQAINSKKQKRKHSSEGKDTKLELSKHSDNKQGKYMGSGKEEASDGGLDSPSSSSSSSSSHAWKSRIIIPTLLAGVAGAGTGLISKHRKTLGLANVCSSYAANFAIITGCYCGAREFVAATRDTGPDDIWNSPLAGFGTGALLGRLQGGQLGAIRYSLAFAVVGTAADFTFLKLKDALRDHAKTIYQDIENSKKSGTWLKLPQWFPIQVLDEEALAAKRAQEEQFLQQRARIRSLKKEEES 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01520 305 Coils Coil 282 302 - -
Spst4g01520 305 MobiDBLite consensus disorder prediction 68 123 - -
Spst4g01520 305 SUPERFAMILY DNA-binding domain 2 37 IPR016177 GO:0003677
Spst4g01520 305 MobiDBLite consensus disorder prediction 73 102 - -
Spst4g01520 305 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 90 290 IPR039175 GO:0042721|GO:0045039
Spst4g01520 305 SMART rav1_2 2 49 IPR001471 GO:0003700|GO:0006355
Spst4g01520 305 Gene3D AP2/ERF domain 1 44 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01520 Spst-Chr4 54105944 54114627 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01520 - - vra:106772976 324.709