Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01508 ATGACCCACTGCCATAGCACCACCACAACATGCTTGCCTCAGAACCATGTTGCACTGTTCATACTTGGAGATTCACTCTTTGATAATGGAAACAACAACTACATCAACACCACCACCGATTACCAAGCAAACTATGCTCCCTACGGAGAAACTTTCTTCAAATACCCCTCTGGCAGGTTTTCTGATGGACGCATGATACCAGATGTCGTTGCTGAACTTGCCAAGTTGCCAATACTTCCACCATACCTGCATCCGGGTCGAGTAGAACATGTCTATGGAGTCAATTTTGCTTCAGGAGGTGCAGGTGCTCTGCGTGAAACTTCTCAAGGATTTGTTGTAGACCTGAAAACTCAGGCCAGTTATTTAAAAAATGTAAAGAATTCATTTGTTCAGAGATTGGGACAGAAAACAGCAGAGGAAATTATGTCAAAATCTGTGTACTTCTTTAGCATTGGATCGAATGACTATGGTTCTCTTCTCCACCCAAACTCAAATCCTGTGATTCTTCCCGTTGATCATCAACCATTTGTAGATACTGTCATTGGAAACCTCACAGACGTCCTCAGAGAAATTTATAATCTTGGAGGAAGGAAATTTGGATTTGTTAACGTGGGTCCAATAGGATGTCTCCCTGCCATAAGGGTTTTGGTCAATAATGGAAGCACGTGCCTTGAAGAATTTTCAGCCATAGGAAGACTGCACAACATTGCACTTTCAAAAAGGCTTCAAGAGCTAGAGAAACAGCTCAAGGGATTTAAATACTCAATCAATGATTTTTATGGAGCATTATCTGAAGTGCTGAACTATCCTACAAAATATGGTTTCAAAGAATCGAGTAAGTCATGTTGTGGAGGTGGACCATATAGAGGAGATGGTAGTTGTGGAGGGAACAAAGGGATCAAAGAATACGAGTTATGTGACAATCCCAATAAATATTTGTTCTTCGATTCTAATCATCTTACTGATAGAGCTAGCCAGCATTTCGCCCAGTTGGCATGGAATGGAAATCGCACTGTTGCAAGTCCTTACAATCTGAAACAACTCTTTGAATTTTGA 1056 0.411 MTHCHSTTTTCLPQNHVALFILGDSLFDNGNNNYINTTTDYQANYAPYGETFFKYPSGRFSDGRMIPDVVAELAKLPILPPYLHPGRVEHVYGVNFASGGAGALRETSQGFVVDLKTQASYLKNVKNSFVQRLGQKTAEEIMSKSVYFFSIGSNDYGSLLHPNSNPVILPVDHQPFVDTVIGNLTDVLREIYNLGGRKFGFVNVGPIGCLPAIRVLVNNGSTCLEEFSAIGRLHNIALSKRLQELEKQLKGFKYSINDFYGALSEVLNYPTKYGFKESSKSCCGGGPYRGDGSCGGNKGIKEYELCDNPNKYLFFDSNHLTDRASQHFAQLAWNGNRTVASPYNLKQLFEF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01508 351 Gene3D SGNH hydrolase 7 338 IPR036514 -
Spst4g01508 351 Pfam GDSL-like Lipase/Acylhydrolase 19 331 IPR001087 GO:0016788
Spst4g01508 351 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 350 IPR044552 -
Spst4g01508 351 CDD SGNH_plant_lipase_like 18 336 IPR035669 -
Spst4g01508 351 SUPERFAMILY SGNH hydrolase 19 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01508 Spst-Chr4 53945515 53947139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01508 18 349 Acyl Lipid Metabolism Gene Families AT4G10950 30.588 3.12e-43 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01508 - - gmx:100808852 599.742