Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01496 ATGATGAGTGTTCAGGTTAGTAACAAGGAAGAATCTTCTGTAATGAAGAATGATGGTTTCAGTGATTTGCAGTTGGTTCATCACTTCAGAGGCGTACTTGTTGCAGTCGCAACGGGTGATAGAGAGAATTACGATGAGCTCGTTGGATATTTGCACCCGAAGAAGAATATTGGTCCTGATGAGGTTGCGATACTTGTGACTACTTTGAAAGCGCTTTCTGGATCAGTGTCCTATATTGATTCTGTTCATCATGAATCCCTTCTTTTTGCTGTTTCAAGAATGAGTCTCTGGAATTATGGAACTGAGGTTATGGATGCACTGGTGGAACTCATTGTATCTTTGGCTGCTTCTAATGGGAAATACGTTGATTGGTGTTTGGAGATGCTTGTCAAACATTTTGTGCCGCCTTTTTACCTCGTTAATTCTCTGAAACACGAGAGTAGAATTGACAGGAAAAATGAAGTTCTATCTCGGGTGCATGCTGCTTTGAAAGAGATAGCTGAGTTGGTGCCTCTTGCACCCTTGCGATTATCTCCAATTGTTATCCAGAAAATGCCCAGTGCCTTCAGTGACGAACATGAGATTGTCATTTATGTTGAGAATATGCTAAAGCTGGAGAGTGGTGCAATTGGAGAATCTGTTGGTTCTACAATGCTGCCAGCTGTTGTGGATAGGTTGTTAGAGTTGGATGTAGAAATTGGATGGGATGGAATCTTGCAAGAAGATGCCAGAGGCATATTTGATATGGAGTTAGAGGATATTATTAAATTTGCAGACGAGGATGAGAATTGTGATAGTACGCCTCAGTCAGAGTTTTTAAATAAGAAACAAGATAACCTGGTTGTTGAAAAATTAGACAGTCTAATTGTGCTGGCTTTTTTGCACCTTGAATCCTGTCAAAGTAGTGGCCGTTTGGTTAAGGTATTCAATATTCTACTACCTTCATTTCGGAAAACTGTATTGAATGCATATAAGTCAAAATTTACCCAGTTTGTGATGTTCTATGCGTGTGCACTGGACCCTGAAGGATGTGGTGTGAAATTTGGCATGACTCTTACAGAGATATTTGGTTCTGATGTTAATCCACCTATTACAAGGATGAGTGCTGTTGCTTATCTTGCTAGTTATCTGGCTCGTGCAAAGTTTCTTCCGGCTGCATTGGTCACTACCATAATACAAAGCCTGGTTGATCATTGTTATGCTTATTGCAAGATATGTGATTCTAATATGAACCCACGAGCACATCAAGTTTTTTATTCTGGGTGCCAGGCTATCATGTATATTCTGTGTTTTCGCATGAGATCTCTGATGGACATACCTAGGCTTAAATTGCAGCTACTTAATATGCCCATGGAGGCAATCTGGAAACATAAATTGAGTCCCTTGAAGGTGTGTTTGCCTACTGTAGTAGTGGAATTTCTTAGACAGGCAAAGGCTGCTCAACTTTTCATGGCATCGGAGTCATTTGTTTTTAATGACGTTCTCGAGTCTGATCTTTCCAAGGCTTTTGGCGGTATGGATAGACTTGACATGTTCTTTCCGTTTGATCCATGTTTGTTGAAGAAGAGTGAAAGCTACATAAGACCACATTTTGTTCGCTGGTCAAAAGTCAGAACTACATATGATGATGAGGAGGAGGAGGACATTGACGAAGTCAGTGACAGTGGCAGTGAAGTATCAGATGATGATTTTGTTGACAGGAATACAAAAGATATGATTGATGAGGATATGATTGTGACCGTTGAAGATCTTGATTTTAACGCTGACTTGAACAAAATGTCTATCACTCCCAAAAATTCTTTGAAACATGGTCTTATGCGAATGCCAGCAAGAATCAGACCATCCACTAGTCCAGAGTCTCTATGA 1866 0.4025 MMSVQVSNKEESSVMKNDGFSDLQLVHHFRGVLVAVATGDRENYDELVGYLHPKKNIGPDEVAILVTTLKALSGSVSYIDSVHHESLLFAVSRMSLWNYGTEVMDALVELIVSLAASNGKYVDWCLEMLVKHFVPPFYLVNSLKHESRIDRKNEVLSRVHAALKEIAELVPLAPLRLSPIVIQKMPSAFSDEHEIVIYVENMLKLESGAIGESVGSTMLPAVVDRLLELDVEIGWDGILQEDARGIFDMELEDIIKFADEDENCDSTPQSEFLNKKQDNLVVEKLDSLIVLAFLHLESCQSSGRLVKVFNILLPSFRKTVLNAYKSKFTQFVMFYACALDPEGCGVKFGMTLTEIFGSDVNPPITRMSAVAYLASYLARAKFLPAALVTTIIQSLVDHCYAYCKICDSNMNPRAHQVFYSGCQAIMYILCFRMRSLMDIPRLKLQLLNMPMEAIWKHKLSPLKVCLPTVVVEFLRQAKAAQLFMASESFVFNDVLESDLSKAFGGMDRLDMFFPFDPCLLKKSESYIRPHFVRWSKVRTTYDDEEEEDIDEVSDSGSEVSDDDFVDRNTKDMIDEDMIVTVEDLDFNADLNKMSITPKNSLKHGLMRMPARIRPSTSPESL 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01496 621 Pfam RNA polymerase I specific transcription initiation factor RRN3 21 538 IPR007991 GO:0001181|GO:0006361
Spst4g01496 621 MobiDBLite consensus disorder prediction 545 564 - -
Spst4g01496 621 MobiDBLite consensus disorder prediction 545 559 - -
Spst4g01496 621 PANTHER TRANSCRIPTION INITIATION FACTOR IA RRN3 8 619 IPR007991 GO:0001181|GO:0006361
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01496 Spst-Chr4 53629189 53633650 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01496 K15216 - gmx:100814416 1031.17