Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01490 ATGAGATCAGGAAGCACTAGAGGTTCAAATAAAGAACTATTACATTTTTCTTTTTATCAGGAAACAAGCACAATAGGGGAGGGACAAAATCCTGTAAAACATGCTGCACTTAAAGTGCATGCATATGCTTTGAGATTTCTAAAGGCTAATAGGTCTCATGGAATTTCCTCTCAAGCGGAGGCACCAACAACTCCTGAAAAGATATTTGACTCGAGCAGTGTTGATATGTCATGGGATGAGCATCTCAATGAAGAAAATCTTTTCTATGAAGTTCCTCCTACTGCAATGGAAACATATAGAAAGGCTATCGAATCTCATTTCCATCATTTCGAGAAAACTGGGAGTAGCATTCAAGAAGAAGTTGAAACATCTGTGTATGATACCGCAGCAGACTTTGGGTCCCAAGAGAATGCATATGATGAGGAAGGAGAAACTAGCACTTATTACTTGCCCAGTGTCTATGAGGGCAACAAATCATCAAAATCTGCGCAGAGGAAACATAAAAATTTAAAGTGTTATACTCCTAGGTGTGGTGATGCTGGTGCTGATTTGCCTTATGTTCACTATACAATCAGAACTCAACCATCCATGATGTTTGGAAAAAGGCCTGCTAGTTTAAATGTTGGGTCAATACCAACAAAGCGTATGCGAACTGCTACTAGGCATAGAGTTGTTAGCCCTTTCACTAACATTGGGACAGTACAAGCTCAAGCGAAGGCGGATGCTTCAAGTGGTGATACCAATTCCCTTCATGATGACCAGAGTACTTTACATGTTGGACCCCTCATACAGAAAAGTACTGAGGTGGAGTCAGTTCCAGATTTTGAAAAACAGTTATCTTATGATTGTGCAGAAGCATTTGTCAAAACAAAGAAGAAGAAGAAGGCAAAGACTCTGGGTTCTACTTATGATCAGGGATGGCAGTTGGATTCTGTTGTTCTAAATGAGCAGGACATATATGGGGCCTGTGTCTGTAGGTACATACTTAAAACCGGTGCATCTGGGACAGAGACTAGGCTGGTGCATCTGAGACAAAGTCAGAGCCAGTGGATCTGGGACAAGGCTGGGGCCAGTGCATCTAAGACAAAACTGAGGGATCAGTCCAAGAAGAGAGTGGATATTCATCACTTTGAATCTAATGGAAGTAGTGGTAAAGCAACTTGTTTGTATGGGCAACATAACGGGAAGAAGCCAAAGATAATGAGGCCACTTGATAATCCTTTGGACAATATTGTGCCAATGACAAACTCTATTCCTTCTCCAGCTACTTCACAAATGAGTAACATGTCAAATCCAAATAAATTTATTAAGATCATTAGTGGGCGCGACAGGGGCCGGAAGGCTAAAGCTCTGAAGATTTCTGCTGGACAGCCTGGTTCTGGAAGTCCTTGGTCACTATTTGAAGATCAGGCCCTCGTTGTCCTGGTGCATGATATGGGGCCAAACTGGGAGCTCGTAAGTGATGCTATCAATAGTGCTCTCCAAATCAAGTGCGTCTTTCGCAAACCAAAAGAGTGCAAGGACCGTCATAAAATTTTAATGGATAGAACTGGGGACGGTGCAGATAGTGCTGAAGATTCAGGGTCTTCACAGTCTTATCCTTCTACGTTGCCTGGAATTCCTAAGGCATGGAATTTTTTTCTTTTTTCGTGTAGTATTGCCAGGCAGCTGTTTCAACGTTTACAGGGGCCAATGGAGGAGGATACACTGAAGTCTCATTTTGAGAAAATTATAAAGATTGGGCAGAAGCAACATTACCATAAGAATCAGGAAAAGAAGAAAAACAGAGAATTTGGAAAAGTAGTTCTGAAAAATATCATTAGCACAGTGGCAAAGGAATGTATAGCTGTTGTTGAGACAGCTGTCATAACTAAAAGCACAGCTGGCTATCAGCTTTCTAACTACCTGCCACTTGATCTGTGTGAAGCTGAAGAAACAAACCCAGATGTCCCAGTCCTAGGGTATCAAGGTTCTCATCCTGGTGGTTTAACATTACCAAATCAAGGCTCTGTACAGTCAATGCTTCCCACATCTGGGGTGAATTCTTCACTACCTGTGTCTTCTGGTATGCTTCTTGGTCAAAACTTGTCATCTTCATCTGCTCCAGCCGCAGCATCTGTCAGGGGTGGTAGATATGGAATTCCAAGGAACTCACCTTCATCAGTCGATGAGCAACAGAGAATACAATACAATCAAATGTTATCTGGAAGAAACATTCAGCAAAGCATGTCAGTTGCTGGGACAATTTCTGGAAGTGACCATGGTGTTCGCATGCTTCCCAGTGGAAATAGTATGGGCATAATGGCTGGAATTAACAAAACTATGGCAATGCCTAGGCCAGGGTTTCAAGGAATGGCATCACCATCGATGCTGAATTCTGGAAGCATTATTTCCGCTAGTATGGTTGGGATGCCAAGCCCTGTAAATATGCACTCTGGAGTTGGTCCTGGACCAGGCAATTCAATTTTAAGGTCACATGAGACTCTGCATATGATGAGGCCTGGCCATAACCCAGATCATCAAAGACAGATGATGGTTCCAGAGCTTCAAATGCAGGTCACCCAAGGGAACAGTCAAGGTATTCCTGCTCTGTGTGGGCTGAGTTCTGCCTTTAGCAATCAGACAACAACACCTGTTCAGCCTTACCCAGGACATGCTCAGCAGCCACACCAACTGTCGCAGCAGCAGTCCAATCTCAGTAATCCTCGTCCTCATCTTCAAGGTCCAAGTCATACTAATTCACAGCAGCAAGCCTATGCTGTCCGGTTGGCGAAAGAAAGGCAAATGAAGCAACGATATCTCCAGCACCAGCAGCAGCTTGCTGCATCAAATGCATTAATGCCACATGTCCAGCCAACATCTAAACTTCCCATATCATCATCACCATTGCAGAACAGTTCTCAAATTCAACCACAAAATTCTTCTCAGCAAGTCCCTCATTCACCTATAACATCATCATCCCCTTTGACTCCCTTGTCATCCCAGCTGCAACAGCAGAGACTTCACCAGCCTCAACCTGTGTTCAGCAGAAATCCCCCTGCTAGTGGGTTGACTAATCAAGCAGCAAAACAACGCCCACGGCAGCAGCAGCTGCCGCCACAGCAGTATCAACAGTCTAGTAGGCAGCATCCTAATCAACGGCATAATGTACAGTCTCAACAGCAGGCAAAACTTCTGAAGGGAATGGGAAGAGGAAATATGTTGGTCCATCCCAACCTCTCTGTGGATACTTCTCATCTTAGTGGACTCTCTCTGCCTGTGGGAAGTCAAACTGGTGAGAAAGGGGACAAAATCATGCCCATGATGCCAGGTCAAAATATATATTCGGGATCTGGTTTAAACTCAAATCAGCCATCAAAGCCTTCGGATCATGCCCATTCTTCAAATCATTCACAATTGCAGCAGAAGTTACATTCTGGGTCACCAACCACTTCATCCAAGCAACTTCATATTCCTTCAGATACAAGTTCTCAAGCACAGGATTCACAGGTTTCATCGGGTCAGTTGTTGTCACCTTCACAGCCAGCTGTTATTGCTTCTAACCACCATCAGCTGCAGCCACAGACTCAGTCTAAGAAAATTAATAATACTCAAACAAACATTCAGAGAATGTTGCCGCAAAACCATCATATTCATTCTGAGTCATTAAGCAAGTCACAGTCTGGCCCAACTCAAGCTGATCAACAGCCTGCAAGCAGCGCTTCCCAGGTTAGCACATGTCCTACAGTGACTCAGAGTTGTATGGATCCTGTTAGTATGGTACCAGCTAGTACAACAGTATCTTCTCTGTGGAAAACATCCGAACGGCCATTTGATTCCACTATGAACAATCAAACAACTCAAATGAGCTCCTTGGGGAGTGCGCCTGCTGGAAATGAGCAACCAACAATTAGTCAAGGATTGGAGCCAAGTTTAGTTAGCTTGACTTCTCATGCACATAATTCTGATACACAGTGGAAAAAACGTCAGCTACAATCTCTCCAACAGTCATCACAACCCATCCTATCTCAGCAGCCATATCAGGCTGAGCAGAAGCATGAGCAAGAACAACATTCACCCAAAGATCTTGTCCTACAACATCAACCTCAGCAACATATGCAGCATCTACAATCAGGGCAGAGTAGTATGTTTATCCAGCCACCTGATTCTAAAGTTGAATGA 4161 0.4374 MRSGSTRGSNKELLHFSFYQETSTIGEGQNPVKHAALKVHAYALRFLKANRSHGISSQAEAPTTPEKIFDSSSVDMSWDEHLNEENLFYEVPPTAMETYRKAIESHFHHFEKTGSSIQEEVETSVYDTAADFGSQENAYDEEGETSTYYLPSVYEGNKSSKSAQRKHKNLKCYTPRCGDAGADLPYVHYTIRTQPSMMFGKRPASLNVGSIPTKRMRTATRHRVVSPFTNIGTVQAQAKADASSGDTNSLHDDQSTLHVGPLIQKSTEVESVPDFEKQLSYDCAEAFVKTKKKKKAKTLGSTYDQGWQLDSVVLNEQDIYGACVCRYILKTGASGTETRLVHLRQSQSQWIWDKAGASASKTKLRDQSKKRVDIHHFESNGSSGKATCLYGQHNGKKPKIMRPLDNPLDNIVPMTNSIPSPATSQMSNMSNPNKFIKIISGRDRGRKAKALKISAGQPGSGSPWSLFEDQALVVLVHDMGPNWELVSDAINSALQIKCVFRKPKECKDRHKILMDRTGDGADSAEDSGSSQSYPSTLPGIPKAWNFFLFSCSIARQLFQRLQGPMEEDTLKSHFEKIIKIGQKQHYHKNQEKKKNREFGKVVLKNIISTVAKECIAVVETAVITKSTAGYQLSNYLPLDLCEAEETNPDVPVLGYQGSHPGGLTLPNQGSVQSMLPTSGVNSSLPVSSGMLLGQNLSSSSAPAAASVRGGRYGIPRNSPSSVDEQQRIQYNQMLSGRNIQQSMSVAGTISGSDHGVRMLPSGNSMGIMAGINKTMAMPRPGFQGMASPSMLNSGSIISASMVGMPSPVNMHSGVGPGPGNSILRSHETLHMMRPGHNPDHQRQMMVPELQMQVTQGNSQGIPALCGLSSAFSNQTTTPVQPYPGHAQQPHQLSQQQSNLSNPRPHLQGPSHTNSQQQAYAVRLAKERQMKQRYLQHQQQLAASNALMPHVQPTSKLPISSSPLQNSSQIQPQNSSQQVPHSPITSSSPLTPLSSQLQQQRLHQPQPVFSRNPPASGLTNQAAKQRPRQQQLPPQQYQQSSRQHPNQRHNVQSQQQAKLLKGMGRGNMLVHPNLSVDTSHLSGLSLPVGSQTGEKGDKIMPMMPGQNIYSGSGLNSNQPSKPSDHAHSSNHSQLQQKLHSGSPTTSSKQLHIPSDTSSQAQDSQVSSGQLLSPSQPAVIASNHHQLQPQTQSKKINNTQTNIQRMLPQNHHIHSESLSKSQSGPTQADQQPASSASQVSTCPTVTQSCMDPVSMVPASTTVSSLWKTSERPFDSTMNNQTTQMSSLGSAPAGNEQPTISQGLEPSLVSLTSHAHNSDTQWKKRQLQSLQQSSQPILSQQPYQAEQKHEQEQHSPKDLVLQHQPQQHMQHLQSGQSSMFIQPPDSKVE 1386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01490 1386 MobiDBLite consensus disorder prediction 1080 1171 - -
Spst4g01490 1386 PANTHER CHROMATIN MODIFICATION-RELATED PROTEIN EAF1 A-RELATED 21 317 IPR044798 GO:0035267
Spst4g01490 1386 SMART sant 460 516 IPR001005 -
Spst4g01490 1386 Gene3D - 459 516 - -
Spst4g01490 1386 MobiDBLite consensus disorder prediction 951 1057 - -
Spst4g01490 1386 FunFam Helicase/SANT-associated, DNA binding protein 457 520 - -
Spst4g01490 1386 MobiDBLite consensus disorder prediction 875 917 - -
Spst4g01490 1386 ProSiteProfiles Myb-like domain profile. 462 514 IPR001005 -
Spst4g01490 1386 MobiDBLite consensus disorder prediction 1310 1343 - -
Spst4g01490 1386 MobiDBLite consensus disorder prediction 1265 1298 - -
Spst4g01490 1386 MobiDBLite consensus disorder prediction 1107 1171 - -
Spst4g01490 1386 CDD SANT 463 509 IPR001005 -
Spst4g01490 1386 MobiDBLite consensus disorder prediction 1210 1237 - -
Spst4g01490 1386 MobiDBLite consensus disorder prediction 1355 1380 - -
Spst4g01490 1386 Pfam Myb-like DNA-binding domain 464 513 - -
Spst4g01490 1386 MobiDBLite consensus disorder prediction 1310 1386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01490 Spst-Chr4 53512282 53523480 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01490 - - gmx:100811365 1897.48