Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01482 ATGGGCAACTTAATCAAATTCTTCGAGTTGAACACAGGGGCCAAAATCCCTTCTCTTGGGTTAGGCACATGGCAAGCTGAACCAGGAGTTGTAGCACAAGCTGTCACCACAGCCATCAAGGTTGGATACAGGCACATTGACTGTGCTCAAGCTTATAACAATCAAGCAGAGATTGGTTCTGCTCTTAAGAAGGTTTTTGATGATGGTGTGGTGAAGCGTGAGGACTTATGGATCACTTCCAAACTCTGGTGCTCAGATCATGCTCCAGAAGATGTGCCAAAAGCTTTGGATAAAACATTACGGGATTTGCAACTTGACTACCTTGATCTCTATCTGATCCACTGGCCAGTCCGCATGAAAAGTGGATCAAATGGATTCAAGAAAGAATATCTGGCCCAACCAGACATTCCCAGCACATGGAGAGCAATGGAAACACTCTATGACTCTGGCAAGGCTAGAGCCATAGGAGTCAGCAATTTCTCTTCAAAGAAACTTCAAGATTTGTTGGACACAGCAAGAGTTCCTCCTGCTGTTAACCAAGTGGAATTGCACCCAGGATGGCAGCAACCAAGGTTGCATGCGTTCTGTGAATCTAAAGGAATTCATCTATCTGGATACTCTCCACTAGGCTCACCAGGAAATCTGAAAAGTGACATTCTTAAGAATCCTGTTGTCTTAGAGATTGCAGAGAAATTGGGGAAGACACCAGCTCAAGTTGCCCTTCGGTGGGGATTGCAATCAGGTCATAGTGTGCTGCCAAAGAGTACTAATGAGTCCAGGATCAAGGGAAACTTTGATATCTTTGACTGGTCTATTCCAGAAGAACTAATGGCCAAGTTCTCTGAAATTAAGCAGGATAGACTAATTAAGGGCACTTTTTTTGTTGACGAGACCTATGGTGCCTACAAGACAGTTGAAGAGCTCTGGGATGTTGACCTATTCGTTACGCCGTTCTCTCTGTGGTCACGGCCCCAGGCTCGGTTACGTTCTGCACCGTCGATAATGGCCGGCGATGATATTCGATTCTTCGAGCTGAACACCGGCGCAAAGATACCTTCCGTTGGTTTGGGCACGTGGCTCGCTGAACCTGGCGTTGTTGCTCACGCCTTGACCACCGCAACAAACGTTGGGTATCGGCATATAGATTGTGCGCAAATTTATGGAAACGAGAAGGAGATTGGTGATGCCTTGAAGAAGTTGTTTGATGATGGTGCAGTTAAGCGTGAAGATATGTTTATCACCTCCAAGCTATGGTGTAATGATCACTTGCCGGAAGATGTCCCGAAGGCTTTTGATAGAACTTTACGTGACTTGAAACTGGACTATTTGGATCTCTACCTTATTCATTGGCCAGTGAGCGCAAAAAACGGACAGCTTACCAAACCTGACATACTTAGCACTTGGAGAGCAATGGAAGCACTCTACAATTCTGGCAAGGCTCGAGCTATAGGGGTCAGCAATTTCTCTGTAAAGAAGCTTCAGGATCTGTTGGATGTGGCACATGTGCCTCCAGCTGTTAACCAAGTTGAATTGCATCCTTCTTTACAGCAACCAAAATTGCATGTTTTCTGCAAAGCCAAGGGAGTGCACTTATCAGGTTATTCACCTCTGGGTAAGGGATTAAGTGAAAGTAATCTCCTTAAAAACCCAGTTCTGCACACGACTGCAGAGAAGTTAGGGAAAACTCCAGCACAAATAGCTCTCAGATGGGGACTACAAATGGGTCACAGTGTACTTCCTAAGAGTACAAATGATGCTAGGCTCAAGGAAAACTTTGATCTATTTGATTGGTCTATACCTGCAGATTTGCTTGCCAACTTCTCTGACATTGAGCAGGAGAGAATAGTTACTGGAGATGCTTTTGTTAGCAAGACATCTCCTGGATACAAGACAATTGAAGAACTCTGGGATGGTGAATGA 1920 0.45 MGNLIKFFELNTGAKIPSLGLGTWQAEPGVVAQAVTTAIKVGYRHIDCAQAYNNQAEIGSALKKVFDDGVVKREDLWITSKLWCSDHAPEDVPKALDKTLRDLQLDYLDLYLIHWPVRMKSGSNGFKKEYLAQPDIPSTWRAMETLYDSGKARAIGVSNFSSKKLQDLLDTARVPPAVNQVELHPGWQQPRLHAFCESKGIHLSGYSPLGSPGNLKSDILKNPVVLEIAEKLGKTPAQVALRWGLQSGHSVLPKSTNESRIKGNFDIFDWSIPEELMAKFSEIKQDRLIKGTFFVDETYGAYKTVEELWDVDLFVTPFSLWSRPQARLRSAPSIMAGDDIRFFELNTGAKIPSVGLGTWLAEPGVVAHALTTATNVGYRHIDCAQIYGNEKEIGDALKKLFDDGAVKREDMFITSKLWCNDHLPEDVPKAFDRTLRDLKLDYLDLYLIHWPVSAKNGQLTKPDILSTWRAMEALYNSGKARAIGVSNFSVKKLQDLLDVAHVPPAVNQVELHPSLQQPKLHVFCKAKGVHLSGYSPLGKGLSESNLLKNPVLHTTAEKLGKTPAQIALRWGLQMGHSVLPKSTNDARLKENFDLFDWSIPADLLANFSDIEQERIVTGDAFVSKTSPGYKTIEELWDGE 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01482 639 Pfam Aldo/keto reductase family 19 283 IPR023210 -
Spst4g01482 639 Pfam Aldo/keto reductase family 365 606 IPR023210 -
Spst4g01482 639 CDD AKR_AKR4C1-15 341 616 IPR044498 GO:0016491
Spst4g01482 639 ProSitePatterns Aldo/keto reductase family signature 1. 42 59 IPR018170 GO:0016491
Spst4g01482 639 PANTHER ALDO/KETO REDUCTASE 7 285 - -
Spst4g01482 639 FunFam NADPH-dependent aldo-keto reductase, chloroplastic 5 313 - -
Spst4g01482 639 ProSitePatterns Aldo/keto reductase family putative active site signature. 579 594 IPR018170 GO:0016491
Spst4g01482 639 PRINTS Aldo-keto reductase signature 143 160 IPR020471 GO:0016491
Spst4g01482 639 PRINTS Aldo-keto reductase signature 219 243 IPR020471 GO:0016491
Spst4g01482 639 PRINTS Aldo-keto reductase signature 177 206 IPR020471 GO:0016491
Spst4g01482 639 PRINTS Aldo-keto reductase signature 98 116 IPR020471 GO:0016491
Spst4g01482 639 PRINTS Aldo-keto reductase signature 38 62 IPR020471 GO:0016491
Spst4g01482 639 ProSitePatterns Aldo/keto reductase family putative active site signature. 252 267 IPR018170 GO:0016491
Spst4g01482 639 Gene3D - 340 639 IPR036812 -
Spst4g01482 639 CDD AKR_AKR4C1-15 6 290 IPR044498 GO:0016491
Spst4g01482 639 Gene3D - 4 313 IPR036812 -
Spst4g01482 639 ProSitePatterns Aldo/keto reductase family signature 2. 471 488 IPR018170 GO:0016491
Spst4g01482 639 ProSitePatterns Aldo/keto reductase family signature 2. 143 160 IPR018170 GO:0016491
Spst4g01482 639 ProSitePatterns Aldo/keto reductase family signature 1. 377 394 IPR018170 GO:0016491
Spst4g01482 639 SUPERFAMILY NAD(P)-linked oxidoreductase 343 617 IPR036812 -
Spst4g01482 639 SUPERFAMILY NAD(P)-linked oxidoreductase 6 289 IPR036812 -
Spst4g01482 639 FunFam NADPH-dependent aldo-keto reductase, chloroplastic 340 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01482 Spst-Chr4 53435335 53444159 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01482 K00002 - smil:131022926 881.322