Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01478 ATGGCCAATGGGAAGGTGATTGGTGGAAATGTGTTGTGGTTGTTAGTGTATAAGGTTGATTGTGTAGAGGAGGATTACACACAAATGATTTGGTTGGCGTGGCTAGGGTTCTACATTGAGATTTCCAATTCAAAATTGGTTGAGAAGAAGAAGAAGAAAAAGGAGGAGGGGATGATGAAGCGGCTGTTGGGTGGGCCCGGAACGATTAGCGGCTTTCTGTTGAGGTTTGGCCAATGTGCATTTGGTGCCGCTTCAATTGCTCTTATGGTCACTGGTTTTGGCTTCTCTAGCTACACTGCTTTCTGCTATTTAATTGCATCAATGGGACTTCAATTTCTCTGGAGCTTTGGACTTGCATGTCTTGATATTTATGCCTTGAGGAGAAAGAGAGACCTACAAAATCCAATTCTTGTCAGCCTGTTTGTTGTAGGTGATTGGGTCACAGCAACTTTATCACTGGCAGCTGCATGCTCATCAGCAGGAGTTGTAGTATTATACTCAAGAGACCTGAATATGTGTGCGAATAGTAAGCGTCTCACATGCAACAAGTATCAGATTTCTGTAGCCATGGCTTTTGTCACCTGGGTTCTTACAGCAATGTCATCGCATGTGATGTTCTGGATCTTGGCCTCAGTCTAG 639 0.4397 MANGKVIGGNVLWLLVYKVDCVEEDYTQMIWLAWLGFYIEISNSKLVEKKKKKKEEGMMKRLLGGPGTISGFLLRFGQCAFGAASIALMVTGFGFSSYTAFCYLIASMGLQFLWSFGLACLDIYALRRKRDLQNPILVSLFVVGDWVTATLSLAAACSSAGVVVLYSRDLNMCANSKRLTCNKYQISVAMAFVTWVLTAMSSHVMFWILASV 212
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01478 212 PANTHER CASP-LIKE PROTEIN 5B3 59 212 IPR045009 -
Spst4g01478 212 Pfam Casparian strip membrane protein domain 66 197 IPR006702 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst4g01478 Spst-Chr4 53371461 53379274 Dispersed/Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01478 - - gmx:100793181 282.722