Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01474 ATGGCATGGCGTCACAAGGCGGTGGTTCCGGGGGCAAAGGCTCTCGGCATCATCTCCTTTGACGCTGGAAAAACCATGTGCCGCCTCATCTCCCTCTACCACTCTCTCTCCGACGAAGAAATCGCCAAGCTCAACCGCGAGGTGATCAAGTCGAAAGGTATAACCTACTTGAATTCCCAACATGAATGCTTCCTCCTCAACCTGGCCGCCGCGGAGCGCCTGGAAGAGCTTGACACGGTTGCCGACAGCGTCTCTCGGCTCGGCCGGAAATGCTTCGACCGCAGCCTCGGAAGCTTTGACCTTGTTTATGCCGATCTAAAGCTCGGCCTTATCGATCTCCGGAAGTTAGGTTATGGTTCGCGTAACAGTCTTAAGATCATCTCCAAAATGGAGAAACTTGTTTCTTCTACCAGGAATCTCTACATGGCCATGGAATCCATGGCGGTACTAGAAAATTCAGAGAAGAAGAGACAAAGATTGAAGACTAATGATTATAACAACTGGTCGAAACAAAACTTGGATTACTTGAATGAGGAGATAGCATGTTGTAGAAAACAAGTGCAGCATTATAAGGAAGTTTCGTTATGGAATCAAACATTGGACAAAACCGTTGGAATCATGGCTAAGGTAGTTTGCATTGTCTACGCTAGAATTTGTTCTGTTTTTGGAGGGTACATTGCTAACTGCAGCTGCTATAATATAAATGGTGATGGTGACAATGAAAACAATAATTGTTGCTGTCTCTTGGAACACCGTGAGTTGTACAAGAAGAATTATTGTCTGTACGAGGAATCACTTCACAAGCGTGTCTCAAGATCGGGTCCAATTCCAAAGGCTAATAGCAACAAAACCGGTGTAATTCGTTTCTTGAACCGTGAATTTGATAGGCCAACGAATGGCGTTAACAATAGGGTTTTGCGGCTGGCGCCGCCGTCGACGGTGGGTGGGGCGGGGCTTGCGGCGAGGTACGCAGAGGTGGTTTTGCTTGCGGAGCAGTGGCTGCACGCGCCGGCGATTGTGGGGGAGGACGCGCGGGAGGCGTTTTACGGGATGTTGCCGGAGAGAGTGAGACGAAAGGTGGCGGCGAAGCTGAAGGGGAGGTGGCGGAGGGAAGAGGAGGAGGAGGCGCTGGCGGAAGGGTGGCGGGACGCGGTGGAGGAGCTCCTGGAGTGGCTATCGCCAGTGGCGCATGACACAGTGCGGTGGCAGGCGGAGAGGAGCATGGAGACGGCGAAGTTTGAGGCGAAGACGACGGCGCTGCTGCTGCAGACGCTGCATTACTCCGACTTGGAGAAGGCGGAAGCCGCCATTGTGGAGGTGTTGGTGGGTTTGAGTTGCATATATTGGTGTGAGAGAACACGAAATAAAAAAAACAAGAGAAATTATTGCTGGTCCTAG 1398 0.5122 MAWRHKAVVPGAKALGIISFDAGKTMCRLISLYHSLSDEEIAKLNREVIKSKGITYLNSQHECFLLNLAAAERLEELDTVADSVSRLGRKCFDRSLGSFDLVYADLKLGLIDLRKLGYGSRNSLKIISKMEKLVSSTRNLYMAMESMAVLENSEKKRQRLKTNDYNNWSKQNLDYLNEEIACCRKQVQHYKEVSLWNQTLDKTVGIMAKVVCIVYARICSVFGGYIANCSCYNINGDGDNENNNCCCLLEHRELYKKNYCLYEESLHKRVSRSGPIPKANSNKTGVIRFLNREFDRPTNGVNNRVLRLAPPSTVGGAGLAARYAEVVLLAEQWLHAPAIVGEDAREAFYGMLPERVRRKVAAKLKGRWRREEEEEALAEGWRDAVEELLEWLSPVAHDTVRWQAERSMETAKFEAKTTALLLQTLHYSDLEKAEAAIVEVLVGLSCIYWCERTRNKKNKRNYCWS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01474 465 Pfam Protein of unknown function (DUF668) 313 401 IPR007700 GO:0045927
Spst4g01474 465 Pfam Domain of unknown function (DUF3475) 17 72 IPR021864 GO:0045927
Spst4g01474 465 PANTHER BNAC09G50660D PROTEIN 13 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01474 Spst-Chr4 53344273 53345670 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01474 - - gmx:102667149 697.967