Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01473 ATGGCAGCCTCAGTGCCAACAGTTGGAGCCGTTAACTTAGCACCGTTGAAACTGAATGGCTCTAGCAGTGGAGTGACATGCTCGGCATTCTTTGGAACCAGTTTGAAGAAAATCATTTCTCTGAGTTCTAGCCAGAAGAGTGTGTGTGGGAATTTCAAGATGACCAGCAGGATATCACTAGAGGGAAGGGAATGGTGGACTCTCTTCCAAGCTCCCATGGAAAGTGGCACTCACTATGCTGTCATGAGTTCCTATGAATACATCAGTGCTGGTCTTCGCCAGTACAATTTGGACAACACCATGGATGGCTTCTATATTGCTCCTGCATTTATGGACAAAATTGTTGTTCACATCACCAAGAACTTTTTAACCTTGCCTAATATCAAGGTTCCTCTTATTTTGGGTATTTGGGGAGGCAAAGGTCAGGGGAAATCATTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATAATGATGAGTGCTGGAGAATTGGAGAGTGGAAATGCTGGAGAGCCTGCAAAGTTGATTAGGCAAAGGTACCGTGAGGCAGCAGACATTATCAGAAAAGGAAAGATGTGCTGTCTCTTCATCAATGATCTTGATGCTGGAGCTGGTAGGCTTGGTGGAACCACACAGTACACAGTCAACAACCAGATGGTGAATGCAACACTCATGAACATTGCTGACAACCCAACCAATGTCCAACTTCCTGGCATGTACAACAAGGAGGAGAATCCCCGTGTTCCAATCATAGTCACTGGCAATGACTTCTCAACATTGTATGCTCCTCTCATTCGTGATGGACGTATGGAGAAATTCTATTGGGCACCTACTCGAGATGACAGGATTGGTGTCTGCCAAGGCATTTTCAGAACAGATGGTGTCCCAAAGGAGGACATTGTCAAGCTTGTTGACACCTTCCCTGGACAATCTATTGACTTCTTTGGTGCCTTGAGGGCCAGAGTGTATGACGATGAAGTAAGAAAGTGGATTTGTGGTGTGGGGGTGGAGAATATTGGGAAAAGACTGGTGAATTCAAAGGAGGGACCTCCAACTTTTGAGCAACCAAAGATGTCTCTTAGCAAGCTCCTTGAGTATGGAAACATGCTTGTTCAAGAGCAAGAGAATGTGAAGAGAGTTCAATTGGCTGACAAATACCTCAATGAGGCTGCACTTGGAGATGCAAATGAAGATGCCATGAAGACTGGAAACTTCTATGGACAAGGAGCTCAGCAAGTTCATGTTCCTGTTCCTGAAGGTTGCACTGACCCTGCTGCACAAAACTATGATCCAACAGCCAGAAGTGATGATGGAAGTTGCACATACACATTTTAG 1344 0.4524 MAASVPTVGAVNLAPLKLNGSSSGVTCSAFFGTSLKKIISLSSSQKSVCGNFKMTSRISLEGREWWTLFQAPMESGTHYAVMSSYEYISAGLRQYNLDNTMDGFYIAPAFMDKIVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCQGIFRTDGVPKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWICGVGVENIGKRLVNSKEGPPTFEQPKMSLSKLLEYGNMLVQEQENVKRVQLADKYLNEAALGDANEDAMKTGNFYGQGAQQVHVPVPEGCTDPAAQNYDPTARSDDGSCTYTF 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01473 447 PANTHER - 66 445 IPR044960 -
Spst4g01473 447 Pfam ATPase family associated with various cellular activities (AAA) 136 277 IPR003959 GO:0005524|GO:0016887
Spst4g01473 447 MobiDBLite consensus disorder prediction 431 447 - -
Spst4g01473 447 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 281 393 - -
Spst4g01473 447 MobiDBLite consensus disorder prediction 427 447 - -
Spst4g01473 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 305 IPR027417 -
Spst4g01473 447 Gene3D - 96 280 IPR027417 -
Spst4g01473 447 Gene3D - 281 393 - -
Spst4g01473 447 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 96 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01473 Spst-Chr4 53330089 53332985 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01473 - - gmx:100795298 815.453