Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01468 ATGAATGATAATGATTCATCTGAAAAAACATTTTGGGAAGAAAGTGGATGCATCTACACTTCTTACAACTGGACGCATGTGAGATTGTCTCACGTGCGAGGAAGAGTCGTGGAAACCTTGGCTTGCGAAACGCTGAATTGGCAACGCGAAACCAATCATAATCACAATGTCATCAAATCAGCGTCTTCCACTTCCTGCTGCGCAAAGATGCTCTGCATTTTGGGAAAGCCGAAAAAGACACACCCTCACACATACGACAACGAACACACGACAGCGACAGCGACATCCTCGACCACGTGGCTGCATCAAACGCGAGCAAAACGCCAAAAGGAACATACGCATCACGGGTCGTGCGACGGCTTCTTCTGCGCCGTTGATGGCAGCACCCCACGTGATGTGTTCGTGACGTGGCGTGAATCTAATGGCGTGGTGGTGGTTACGGGGTTGCCGTTTGAGAGCAACAGGTGTCGTTGCGAAAGTGAAGGGATTTTATGCCTCGCAATGATGCGCTCTAGGGTTTGTCGTTTTGTTCAGAAGTATAGGAGACGTGGCAAATCCTCACCTCAATGTTCAGAAATGGAATCAATTTACAATGATGAGTATCTTATTAAGAATCTGAGACTAACACAAAAAATGGAACTTTTGCAGAATGGCCACAAAACCAAACCCTCGGAGATACCCCTCGTCAATGGAACCGCCCTGACTCACCTCAACTCGCTCTTCCAAACTCACTTCTCCGGCAACATCGATCCTTCCAGAGCTTTTGTCTCCAAGGTCAAGCGTCTCATTGTAAAGGTTGGAACAGCTGTTGTTACTCGAAGTGATGGAAGATTAGCGCTTGGAAGAATTGGAGCTCTTTGTGAGCAGCTTAAAGAACTTAGCAGTCAAGGATTTGAAGTCATATTGGTAACTTCAGGTGCTGTTGGCCTTGGCAAACAAAGACTTAGATATCGCAAATTGGCCAATAGCAGTTTTTCTGATCTTCAAAAGCCACAAAGTGAGATTGATGGAAAAGCATGTGCAGCTGTTGGACAAAGTAGTCTCATGGCTCTGTATGATACCATGTTCAGCCAGCTTGATGTGACTTCTTCCCAACTTCTTGTGAATGATGGATTTTTTAGGGATGCTGGCTTCAGAAAACAACTTTCAGACACAGTGAACTCATTGTTAGATTTAAGGGTTATCCCCATTTTCAATGAAAATGATGCTGTTAGTACTAGGAAAGCACCATATGAGGATTCTTCTGGTATTTTCTGGGACAATGACAGTTTGGCTGGTCTATTAGCCTTAGAACTTAAAGCTGATCTCCTTGTTTTATTGAGTGATGTTGAGGGCCTTTATAGTGGTCCTCCAAGTGACCCAAATTCAAAGTTGATTCATACATATATAAAAGAGAAACATCAAGGGGAAATTACTTTTGGAGACAAGTCAAGATTGGGCAGAGGGGGTATGACTGCTAAAGTTAATGCTGCTGTTTGTGCTGCTCATGCTGGTATCCCTGTCATTATAACTAGTGGCTATGCTACAAACAACATCATTCGGGTTCTTCAAGGGGAAAAAATAGGTACTGTCTTTCATAAAGATGCTCATTTATGGACCAATATAAAGGAAGTAAGTGCACGTGAAATGGCAGTTTCAGCACGTGAGAGTTCTAGACGACTTCAGATCCTCAAATATGAAGAAAGGAGTAAAATATTATTGGCAATTGCTGATGCATTGGAGAAAAATGAAAGTATAATATGTCGAGAGAATGAAGCTGATGTTGGTGATGCTGTGACTGCTGGATATGAAAATTCTCTGATATCACGTTTATCCCTGAAGAATAAGAAGATCTCTAGTCTTGCAAAGTCTGTGCGCATGTTGGCAGATATGAAAGAACCAATTGGTCAAATTTTGAAAAGAACTGAGCTAGCAGATGAACTCATCCTGGAGAAAATATCATGTCCTTTGGGAGTCCTTCTGGTTATATTTGAGTCTCGACCTGATGCCCTTGTTCAGATAGCTGCATTGGCAATTCGAAGTGGGAATGGTTTACTGCTTAAAGGTGGAAAGGAAGCTCGACGATCAAATGCAGTCTTACACAAGGTCATTACTTCGGTGATTCCAAATACTGTAGGTGACAAACTTATTGGGCTTGTGACTTCAAGAGATGAAATTCCAGACCTACTTAAGCTTGATGATGTGATAGATCTTGTGGTTCCTAGAGGCAGTAATAAGCTTGTTTCTCAAATCAAGGAATCAACAAAAATTCCTGTTCTTGGACATGCCGATGGAATTTGTCATGTATATGTCGACAAAGCAGCTAATATTGATATGGCAAAACAGATTGTTAGAGATGCAAAGACTGATTATCCTGCAGCCTGCAATGCAATGGAAACTCTTCTTGTACACAAGGATCTATCAAATAATGGTGGACTTAATGAGCTTGTCCTTGAACTCCAACGTGAAGGTGTTAAACTGTATGGTGGACCAAGAGCCAGTGGCTTACTAAACATTGTTGAAACAAGCAGTTTTCATCATGAGTATAGTTCACTTGCTTGCACAGTTGAAATTGTAGAAGATGTGTTTGCTGCCATTAACCACATACAACGACATGGAAGTGCTCATACTGAATGCATTGTTACAGAAGATTGTGAAGTTGCTGAGACTTTCTTGAGTCAAGTTGACAGTGCTGCTGTTTTCCACAATGCAAGCACACGATTTTGTGATGGAGCACGCTTTGGGCTTGGTGCTGAGGTTGGAATTAGCACAAGTCGAATTCATACACGAGGTCCTGTAGGAGTAGAGGGCTTGTTGACAAACAGATGGATTTTGAGAGGGAATGGACATGTGGTTAATGGTGATCAAGGGATCAATTACACTTACAAAGAATTGCCACTAAAAGCATAA 2889 0.4219 MNDNDSSEKTFWEESGCIYTSYNWTHVRLSHVRGRVVETLACETLNWQRETNHNHNVIKSASSTSCCAKMLCILGKPKKTHPHTYDNEHTTATATSSTTWLHQTRAKRQKEHTHHGSCDGFFCAVDGSTPRDVFVTWRESNGVVVVTGLPFESNRCRCESEGILCLAMMRSRVCRFVQKYRRRGKSSPQCSEMESIYNDEYLIKNLRLTQKMELLQNGHKTKPSEIPLVNGTALTHLNSLFQTHFSGNIDPSRAFVSKVKRLIVKVGTAVVTRSDGRLALGRIGALCEQLKELSSQGFEVILVTSGAVGLGKQRLRYRKLANSSFSDLQKPQSEIDGKACAAVGQSSLMALYDTMFSQLDVTSSQLLVNDGFFRDAGFRKQLSDTVNSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSDPNSKLIHTYIKEKHQGEITFGDKSRLGRGGMTAKVNAAVCAAHAGIPVIITSGYATNNIIRVLQGEKIGTVFHKDAHLWTNIKEVSAREMAVSARESSRRLQILKYEERSKILLAIADALEKNESIICRENEADVGDAVTAGYENSLISRLSLKNKKISSLAKSVRMLADMKEPIGQILKRTELADELILEKISCPLGVLLVIFESRPDALVQIAALAIRSGNGLLLKGGKEARRSNAVLHKVITSVIPNTVGDKLIGLVTSRDEIPDLLKLDDVIDLVVPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKAANIDMAKQIVRDAKTDYPAACNAMETLLVHKDLSNNGGLNELVLELQREGVKLYGGPRASGLLNIVETSSFHHEYSSLACTVEIVEDVFAAINHIQRHGSAHTECIVTEDCEVAETFLSQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHTRGPVGVEGLLTNRWILRGNGHVVNGDQGINYTYKELPLKA 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01468 962 ProSitePatterns Glutamate 5-kinase signature. 477 494 IPR019797 GO:0004349|GO:0006561
Spst4g01468 962 NCBIfam glutamate 5-kinase 260 536 IPR005715 GO:0005737|GO:0006561
Spst4g01468 962 Gene3D - 250 532 IPR036393 -
Spst4g01468 962 Hamap Glutamate 5-kinase [proB]. 260 529 IPR005715 GO:0005737|GO:0006561
Spst4g01468 962 ProSitePatterns Gamma-glutamyl phosphate reductase signature. 852 873 IPR020593 GO:0004350|GO:0006561
Spst4g01468 962 PRINTS Glutamate 5-kinase family signature 297 311 IPR001057 GO:0005524|GO:0016301
Spst4g01468 962 PRINTS Glutamate 5-kinase family signature 420 447 IPR001057 GO:0005524|GO:0016301
Spst4g01468 962 PRINTS Glutamate 5-kinase family signature 479 499 IPR001057 GO:0005524|GO:0016301
Spst4g01468 962 PRINTS Glutamate 5-kinase family signature 341 369 IPR001057 GO:0005524|GO:0016301
Spst4g01468 962 PRINTS Glutamate 5-kinase family signature 381 402 IPR001057 GO:0005524|GO:0016301
Spst4g01468 962 FunFam Delta-1-pyrroline-5-carboxylate synthase 249 532 - -
Spst4g01468 962 FunFam Delta-1-pyrroline-5-carboxylate synthase 757 903 - -
Spst4g01468 962 NCBIfam glutamate-5-semialdehyde dehydrogenase 547 934 IPR000965 GO:0004350|GO:0006561
Spst4g01468 962 SUPERFAMILY Carbamate kinase-like 260 527 IPR036393 -
Spst4g01468 962 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 757 903 IPR016163 GO:0016620
Spst4g01468 962 CDD AAK_P5CS_ProBA 252 526 IPR041744 -
Spst4g01468 962 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 548 943 IPR016162 GO:0016491
Spst4g01468 962 Pfam Amino acid kinase family 260 505 IPR001048 -
Spst4g01468 962 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 249 960 - -
Spst4g01468 962 NCBIfam delta l-pyrroline-5-carboxylate synthetase 253 961 IPR005766 GO:0003824|GO:0006561
Spst4g01468 962 Hamap Gamma-glutamyl phosphate reductase [proA]. 539 945 IPR000965 GO:0004350|GO:0006561
Spst4g01468 962 CDD ALDH_F18-19_ProA-GPR 541 941 IPR000965 GO:0004350|GO:0006561
Spst4g01468 962 Pfam Aldehyde dehydrogenase family 536 801 IPR015590 GO:0016491
Spst4g01468 962 SUPERFAMILY ALDH-like 541 944 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01468 Spst-Chr4 53278041 53294180 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01468 K12657 - gmx:100797414 1314.67