Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01452 ATGAAACGAAACCATATTTCCCACAACCACCACCACTCCTACCGACCACGCAAATGGGTGATGATCATCCCCATTGTCATATTATGCATCGTCCTCCTACTACTTATTCTCGGCAAACCCTCTTCTTCTTCATCATCTTCTTCTGCAACATGGTCTTCTTCTAGGCTCAATTTAACGGAAGAAGTAGGAGTGGATCTTCCGAGATTGGCGTACATGTTGACGGGCACTAAAGGAGAGGAAGCGCAGCTTAAGAGGGTCCTTCAGGCAGTGTATCATCCCAGGAACTACTACCTGCTCCATCTCGATCTAGAAGCTTCTGATGCGGAAAGGCTCGAGCTTGCCAAATACGTCAAGTTGGAGACTGTGTTTGCGGCGTTTGGGAACGTCATGGTCGTGGGTAAGTCTGATTTAGTCACCTACAAGGGCCCCACCATGATCGCTTCCACTCTTCACGGGATTGCCCTGTTGCTTAAGAGGGTTCCTCACTGGGACTGGTTTCTCAATCTCAGTGCCTCTGATTATCCTCTCCTCTCCCAGGACGATCTCTTGCACATCTTTTCATTCTTGCCTCGGGATCTAAATTTCATTGAGCATACAAGTAATATTGGTTGGAAAGAGCATCAAAGAGCTAGACCTATCGTTATAGATCCAGGCTTATATCATTCCAAGAAATCTGGTGTTTATTGGGCTAAAGAGAAGAGATCTATTCCTTCATCGTTTAAGATATTCACAGGATCTGAGTGGATTGTCCTGACAAAATCGTTTCTTGAGTTTTGTGTTTGGGGTTGGGACAATCTTCCTCGCACTCTCCTCATGTATTACACGAATTTTCTTTCATCGTCTGAGGGCTACTTCCATACGGTCATTTGCAATCATAAGGACTATCAAAACACGACAATAAATCACGATTTACGTTATATAAGGTGGGACAACCCGCCAAAGCAGCATCCATTGTTCTTGAAGTTGGAGCATTTTGATGAAATGGTCCAAAGTGGTGCTCCTTTTGCTCGGAAGTTTGCCAAGGATGATCCAGTTCTTGATAAAATTGACAAGGAACTCCTGGGAAGATCAAATGGGCACTTTACACCTGGAGGTTGGTGTCTTGGCAGTCCTATTTTGGGAAAAGACCCTTGCACAGTTTATGGAAGTCCAATTGTAATTAAACCTACTTTACGATCAAAGAAGCTAGAAAAACTAATGGTGAAACTATTAGATTCTGAAAATTTTAGGCCGAAACAGTGTAAATAG 1248 0.4367 MKRNHISHNHHHSYRPRKWVMIIPIVILCIVLLLLILGKPSSSSSSSSATWSSSRLNLTEEVGVDLPRLAYMLTGTKGEEAQLKRVLQAVYHPRNYYLLHLDLEASDAERLELAKYVKLETVFAAFGNVMVVGKSDLVTYKGPTMIASTLHGIALLLKRVPHWDWFLNLSASDYPLLSQDDLLHIFSFLPRDLNFIEHTSNIGWKEHQRARPIVIDPGLYHSKKSGVYWAKEKRSIPSSFKIFTGSEWIVLTKSFLEFCVWGWDNLPRTLLMYYTNFLSSSEGYFHTVICNHKDYQNTTINHDLRYIRWDNPPKQHPLFLKLEHFDEMVQSGAPFARKFAKDDPVLDKIDKELLGRSNGHFTPGGWCLGSPILGKDPCTVYGSPIVIKPTLRSKKLEKLMVKLLDSENFRPKQCK 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01452 415 Pfam Core-2/I-Branching enzyme 69 328 IPR003406 GO:0016020|GO:0016757
Spst4g01452 415 PANTHER GLYCOSYLTRANSFERASE 18 414 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01452 Spst-Chr4 52910910 52916303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01452 17 415 Glycosyltransferase AT5G15050 54.940 8.98e-170 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01452 K20891 - gmx:100813028 707.597