Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01451 ATGGCAGACTTGCCGGAAGATTGCCGGCACTCTTCTTACAAGGATCCCGGAAACGGCAAGGACACGGATGATAGTTCAGACACTATTGCCAATGGTACAAGTAGCTCTTCAGCCTCAGACGTTCCTGTCAAGGGGTTGTGTAAAGTGACCACGATGCCAATAGACATATCACATGGAGATAAATTAGAGTCAGGTTCAAGTAAGTTTAGGATGGAAAGGTCAAAAACAGAGAGGCTGAGACACTTAAGTCCTGAAGATGCAGCACAAATTTTTGATGACAAAATTCCTGTCCAGGAGAAGCTTAAATTGTTGAACAGAATAGCTACTGTAAAAGATGATGGAACTGTAGAATTTGAAGTTCCTGTAGATGTTGAACCTGAGGCAATTGTTGCTCAATCCAAGCAAGTAAATCATGTTGTTGATGATTCTCTTGATGCAACAGACTTTCATTACATCCCACCATTGAATATAGTAATACTTATTGTTGGTACACGAGGAGATGTGCAACCCTTTATTGCAATAGGGAAACGCTTGCAGGATTATGGCCATCGGGTTAGATTAGCAACCCATTCAAATTTTAAGGAGTTTGTTTTGACAGCTGGGTTGGAGTTTTATCCTTTAGGCGGTGATCCAAAAGTTCTGGCTGGTTCGTGGGATTCGGATAAATGGATTGTGGGTCCTATGCTATGCTATGAAGATATGGTTAAAAACAAGGGCTTTCTGCCATCGGGACCTTCTGAGATACCTATTCAGCGAAATCAAATGAAAGAAATTATTAATTCTCTGCTTCCAGCTTGTAAAGAACCTGATATTGATTCTGGTGTCCCCTTTAAAGCAGATGCAATCATTGCCAATCCCCCTGCATATGGTGAATATGATGAGTTTCTAAATTATGAATAA 900 0.4078 MADLPEDCRHSSYKDPGNGKDTDDSSDTIANGTSSSSASDVPVKGLCKVTTMPIDISHGDKLESGSSKFRMERSKTERLRHLSPEDAAQIFDDKIPVQEKLKLLNRIATVKDDGTVEFEVPVDVEPEAIVAQSKQVNHVVDDSLDATDFHYIPPLNIVILIVGTRGDVQPFIAIGKRLQDYGHRVRLATHSNFKEFVLTAGLEFYPLGGDPKVLAGSWDSDKWIVGPMLCYEDMVKNKGFLPSGPSEIPIQRNQMKEIINSLLPACKEPDIDSGVPFKADAIIANPPAYGEYDEFLNYE 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01451 299 MobiDBLite consensus disorder prediction 1 22 - -
Spst4g01451 299 Pfam Glycosyltransferase family 28 N-terminal domain 157 290 IPR004276 GO:0005975|GO:0016758|GO:0030259
Spst4g01451 299 Gene3D Glycogen Phosphorylase B; 156 293 - -
Spst4g01451 299 MobiDBLite consensus disorder prediction 23 41 - -
Spst4g01451 299 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 156 288 - -
Spst4g01451 299 MobiDBLite consensus disorder prediction 1 41 - -
Spst4g01451 299 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 36 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01451 Spst-Chr4 52881197 52902498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01451 70 291 Glycosyltransferase AT3G07020 70.044 2.22e-101 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01451 K05841 - gmx:100812490 461.84