Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01447 ATGAGAGGACATATACTCCTGTGCCTTTTTTTCATACCATTTTGTTCAATAAACTATGGTGCCAGTGGCTATTTGCTTGGCCATGAGTGTTCCATGTTGCTCCATTTGAAAAATAGCCTAACATTCAACCCTACAATATCCAAAAAGCTTACTCTTTGGAATCAAAGTGAAGATTGCTGCCAATGGCATGGTGTGACATGCAATGAAAGTCGTGTTATAGCCCTTGATCTCAGTGAGGAGTCTATCTCCGGACAACTTCTTAATTCAAGTGTTCTTTTCAGCCTTCAATATCTTCAAAGATTGAATTTGGCTTTCAATAACTTACGTTTGGTGATTCCTTCTGCACTTCACAAGTTGAATAATTTGAAGTATTTGAACTTGTCAAATGCTGGCTTTGAAGGGCAGATTCCACTTGAGATTTCTCACCTCAGAAGGTTAGTTACTCTTGACTTGTCTTCTTCATTTTCCTCATCACCTCACAGCCTGAAACTCGCAAGGCCAAATTTAGCAAGGATTTTACAAAACCTTACAGATATCACAGAATTATATCTAGATGGTGTAGTGATATCTGCCAATGGACAGGAATGGTCTCATGTTTTATCTTCGTTGCACAACCTACGTGTTCTGAGCATGTCATCATGCAATATCTCTGGACCTATTGATCCTTCCCTTGCTAAGCTTCGGTCACTCGCTGTTCTAAATTTAAGCTACAATAACATGTCTAGCACAATACCAGATTCCTTTATGAATTTCTCTAATCTAGTCACACTAAAACTAAGAAGTTGTGGCTTGAATGGTTCTTTTCCCAAAGATATCTTCCATATACCATCATTAAAGGTCCTTGACATCTCAGACAATGAAGATCTTCTAGGTTCTTTGCCAAACTTCCAACCACGTGGTTATCTTCATGACATGAATCTTAGCACGACAAGTTTCGCAGGAAAGCTTCCGGGTGAAATTTCCAACTTGAAGCATTTATCTACAATTGATCTATCTTACTGCCAATTTAATGGAATACTTCCTACTTCAATGTCAGAACTCACCCAACTAGTTTATCTAGACTTGTCTTCCAATAACTTTTCAGGTCCACTCCCTTCTTTTAATATGTCCAAGAATCTCACATATTTATCCATCTTTCATAATCATTTAACAGGAATGTTACCATCCAGTCATTTTGAGGGCCTTGAAAATCTAGCCAACATTGATTTGGGGTTCAACTTGTTCAAAGGGACTCTTCCCCCATCTCTACTTAAGCTCCCATATTTGCGAGAACTTAAACTTCCCAATAATCAACTCAGTGGTCGCTTGGATGAGTATGTGATTACTTCCCATGTATTAGAGATGCTTGATTTGGGTAGCAACAATTTGGAAGGACCTATTCCTTTGTCTATATTTAACCTTAGAGCACTTCGTGTCATTCAACTTAATTCAAACAAGTTTAATGGCACAATTCAATTGGACATGATTCGCAGGTTGAGCAATCTAACTTCATTATGCCTCTCGCATAACAATTTGTCAGTTGATATATACTCTAGAGATGCTCGTGACCTGTCACCCTTTCCTGCTCTAAGAAATGTAATGTTGACATCATGCAAGCTGAGAGGAATCCCTAGTTTTTTGAGAAATCAATCAAAGTTACTACGTCTTGAGCTAGCTGAAAATGAGATTGAAGGGACAATACCTTACTGGGTTTTGCAACTTGAATATGTTGTTTACTTGAACCTTTCCAAAAATTTCCTAACAAAATTTGAAGGAAATGTTCGGAACCTTAGTTCAAATCTTTTGGTTTTTGATGTTAGTTCCAACCAACTACAAGGACCCTTTCCTTTCAGTCCAACGTTGGTAAATTATTTGGACTACTCAAACAATAGATTAAACTCGGTCATTCCAGTGGACATTGGAAATCGTCTCCCTTTCATAAAATGGTTGTCTCTTTCAAACAACGATATTCAGGGACAGATTCCTGAATCCTTTTCAAATGCTTCAAGTCTGGTCCTGCTGGATCTTTCTCACAATAACTTTGTTGGAACCATTCCCAGATGCTTTGCTAAGTTGAGTAGCACTCTTCGGGTGTTGAACTTTGGTTCAAACAAACTTCAAGGATATATTCCTGATACTTTGCCAGCTTTATGTACTCTCAAGTTATTGGACCTAAATAACAATCTCTTGGAGGGTATCATCCCAACATCATTAGCTTATTGCCAGAAACTACAAGTCCTAAACCTTCGAAGAAATTCATTAACCGACAAATTTCCTTGTTTCTTAAGTAATATTTCCACCTTACGAATCATGGATTTACGGTTGAACAAACTTCACGGGTTAATTGGATGCCCAAAAAGCAGTGGTGATTGGGAAATGCTCCATATTGTTGATATAGCCTCCAATAATTTCAATGGTCCAATACCAGGAGCTTTATTGAACAGTTGGAAAGCAATGATGCGAGACAATGTTAACGCTGAACCAGAACTTGGCCACTTATTCATTGATATCATTGACCACTATGATCCCAAGAATTATAAGGATTTGTTGTTACATTTAGACAAAGTTATTGTAGCAAAATTAACTAAACTTGTTACAAACATATCTCGCTCTATCCTTGACCAGGGATCATCAGATTCTTTTGCAGTGGATTTTTCTCGGTATCAAAATTCAATTCTTATTACAAATAAAGGTCAACAAATAAATTTGGCCAGAATACAGAGGGCCTTCACTTACGTGGACATGTCAAACAACAATTTTGAGGGTCCAATACCAATTGAGCTAATGCAGTTCAAGGCAATAATGGCTCTTAACTTGTCAAATAATGCCCTCTCAGGTCATATCCCATCGTCTATTGAGAATTTGAAGAATCTTGAATCCTTAGACTTGTCAAACAATTTTTTAAATGGAGAAATCCCGAGACAGCTTGCAAGTCTAAATTTTCTTGCATATTTGAATCTCTCAAACAATCACCTGGTGGGTGAAATTCCGAAGGGAACCCAAATTCAAACATTTGAAGGAGATTCCTTTGAAGGAAATGAAAAGTTATGTGGGCCTCCACTGACCCGTATTTGCAGCAATCCTGGAGTGCCAACACCTGAAACACCTCAATCTGATACCAAGAGTTCAATTGATTGGAGTTTATTAAGCGCAGAGTTAGGGTTTATTTTTGGCTTTGGAATTTTCGTCCTCCCCCTTGTTTTCTGGAGGAGATGGAGGTTCTGGTATTCCAAACTCGTGGATGAGATGCTTTACAAGATCATCCCCCAGCTTGATTTTGTGTATGAATACCAACGAGGGCAGAGATGTAAAACTCTAAGGTGGAGGCCCTGA 3312 0.3825 MRGHILLCLFFIPFCSINYGASGYLLGHECSMLLHLKNSLTFNPTISKKLTLWNQSEDCCQWHGVTCNESRVIALDLSEESISGQLLNSSVLFSLQYLQRLNLAFNNLRLVIPSALHKLNNLKYLNLSNAGFEGQIPLEISHLRRLVTLDLSSSFSSSPHSLKLARPNLARILQNLTDITELYLDGVVISANGQEWSHVLSSLHNLRVLSMSSCNISGPIDPSLAKLRSLAVLNLSYNNMSSTIPDSFMNFSNLVTLKLRSCGLNGSFPKDIFHIPSLKVLDISDNEDLLGSLPNFQPRGYLHDMNLSTTSFAGKLPGEISNLKHLSTIDLSYCQFNGILPTSMSELTQLVYLDLSSNNFSGPLPSFNMSKNLTYLSIFHNHLTGMLPSSHFEGLENLANIDLGFNLFKGTLPPSLLKLPYLRELKLPNNQLSGRLDEYVITSHVLEMLDLGSNNLEGPIPLSIFNLRALRVIQLNSNKFNGTIQLDMIRRLSNLTSLCLSHNNLSVDIYSRDARDLSPFPALRNVMLTSCKLRGIPSFLRNQSKLLRLELAENEIEGTIPYWVLQLEYVVYLNLSKNFLTKFEGNVRNLSSNLLVFDVSSNQLQGPFPFSPTLVNYLDYSNNRLNSVIPVDIGNRLPFIKWLSLSNNDIQGQIPESFSNASSLVLLDLSHNNFVGTIPRCFAKLSSTLRVLNFGSNKLQGYIPDTLPALCTLKLLDLNNNLLEGIIPTSLAYCQKLQVLNLRRNSLTDKFPCFLSNISTLRIMDLRLNKLHGLIGCPKSSGDWEMLHIVDIASNNFNGPIPGALLNSWKAMMRDNVNAEPELGHLFIDIIDHYDPKNYKDLLLHLDKVIVAKLTKLVTNISRSILDQGSSDSFAVDFSRYQNSILITNKGQQINLARIQRAFTYVDMSNNNFEGPIPIELMQFKAIMALNLSNNALSGHIPSSIENLKNLESLDLSNNFLNGEIPRQLASLNFLAYLNLSNNHLVGEIPKGTQIQTFEGDSFEGNEKLCGPPLTRICSNPGVPTPETPQSDTKSSIDWSLLSAELGFIFGFGIFVLPLVFWRRWRFWYSKLVDEMLYKIIPQLDFVYEYQRGQRCKTLRWRP 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01447 1103 Gene3D Ribonuclease Inhibitor 514 612 IPR032675 -
Spst4g01447 1103 SUPERFAMILY L domain-like 31 294 - -
Spst4g01447 1103 SMART LRR_typ_2 395 419 IPR003591 -
Spst4g01447 1103 SMART LRR_typ_2 492 517 IPR003591 -
Spst4g01447 1103 SMART LRR_typ_2 948 972 IPR003591 -
Spst4g01447 1103 SMART LRR_typ_2 227 250 IPR003591 -
Spst4g01447 1103 SMART LRR_typ_2 95 118 IPR003591 -
Spst4g01447 1103 SMART LRR_typ_2 637 660 IPR003591 -
Spst4g01447 1103 SMART LRR_typ_2 347 369 IPR003591 -
Spst4g01447 1103 SMART LRR_typ_2 710 733 IPR003591 -
Spst4g01447 1103 Gene3D Ribonuclease Inhibitor 297 411 IPR032675 -
Spst4g01447 1103 Gene3D Ribonuclease Inhibitor 412 513 IPR032675 -
Spst4g01447 1103 SUPERFAMILY L domain-like 268 556 - -
Spst4g01447 1103 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 389 484 - -
Spst4g01447 1103 SMART LRR_sd22_2 492 519 - -
Spst4g01447 1103 SMART LRR_sd22_2 948 974 - -
Spst4g01447 1103 SMART LRR_sd22_2 370 397 - -
Spst4g01447 1103 Gene3D Ribonuclease Inhibitor 613 1022 IPR032675 -
Spst4g01447 1103 Gene3D Ribonuclease Inhibitor 26 193 IPR032675 -
Spst4g01447 1103 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 895 1018 - -
Spst4g01447 1103 Pfam Leucine Rich Repeat 664 685 IPR001611 GO:0005515
Spst4g01447 1103 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 296 387 - -
Spst4g01447 1103 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 581 820 - -
Spst4g01447 1103 SUPERFAMILY L domain-like 667 1015 - -
Spst4g01447 1103 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 356 1019 IPR046956 -
Spst4g01447 1103 SUPERFAMILY L domain-like 516 686 - -
Spst4g01447 1103 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Spst4g01447 1103 Pfam Leucine rich repeat 205 264 IPR001611 GO:0005515
Spst4g01447 1103 Pfam Leucine rich repeat 928 985 IPR001611 GO:0005515
Spst4g01447 1103 Gene3D Ribonuclease Inhibitor 194 296 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01447 Spst-Chr4 52838507 52841818 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01447 9 1065 Receptor kinase-like Gene Family AT1G47890 32.502 3.74e-125 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01447 - - gmx:100791529 1696.79