Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01432 ATGGACAATGTCTCTTCTTACCTTGCATGCTTCCTCCTCCTCCTTTTCCTCACACACGCACGTGCCGACCTCCCTGGCACATGGGAGCTTCTCGTCCCCGACGCCGGCGTCGCCTCCATGCACACGGCGGTCACGCGCTTCAACACGGCGGTCCTCCTCGACCGCACCAACATCGGCCCCTCAAGAAAACTCCTCCCCAAGGGCAACTGCCGCTACGACCGAAACGACGCCCTCTTGAAACGCGACTGCTACGCCCACTCCGTCCACCTCGACCTCCAAACCAACCAAGTCCGTCCCTTGAAAATCCTCACCGACACGTGGTGTTCCTCCGGCCAGTTTCTCCCCGACGGCACGCTTTTGCAGACCGGTGGCGACCTCGACGGGTTGAAAAAGATCCGAAAGTTCAGCCCGTGCGACGCAAGCGGGACTTGCGACTGGGAAGAGCTAAACGACGTTGAATTGGCGGAAGGCAGATGGTACGCCACAAACCAGATTTTACCGGACGGGTCGGTGATTATAATCGGTGGAAGAGGGTCCAACACCGTCGAGTTTTTCCCTCCGAGAAAAAACGGCGCCGTTTCGTTTCCCTTTTTGTCTGAAACGGAAGACACTCAGATGGATAACTTATATCCTTACGTCCACCTTCTTCCAAACGGTCACCTTTTCGTTTTCGCCAACACGCGGTCGGTGATGTATGATTTCACGCGCCACGTCATCGTTAAGGAGTACCCTAAATTGGAGGGCGGTCCGCGGAACTACCCTTCCGCAGGGTCCTCCGCGATGCTGGCTTTACAAGGGGACTACTCAACCGCGGAGATTGTTGTATGTGGCGGCGCGCAATACGGTGCGTTTTTGATGCAGAGTACGGACACCCCGGCGCACGGTAGCTGCGGGCGCATATTAGCTGTGGGGGACGATGAGAATCCGAAATGGGAAATGGAGGACATGCCGTTCGGGAGAATCATGGGGGATATGGTGATGCTTCCAAACGGCGACGTTTTGATTATTAATGGAGCGATGTCCGGGACACAGGGGTTTGAGTCGGCTCGTAATCCTTGTTTGAATCCGGTTCTGTACCGGCCCGATCAACCGGTTGGTTTGCGGTTCATGGTTTTGAACCCTGGCACTGTTCCGAGAATGTACCATGCAACCGCGAATTTGCTACCCGATGGGAGGGTTCTCCTTGCCGGGAGTAACCCGCATGTTTTGTACCGGTTCGACGCTGAGTTCCCGACCGAGTTACGAGTGGAAGCGTTTTCGCCCGAGTATTTATCCGCGGACCGGGCGAATCTTAGACCGGTCATTGAGGAGGTACCTGAAACGGTGCGGTTTGGGGGGAGTTTCGATGTGGTGGTTTCGGTTTCTTTGCCGGTGGTGGGGATTGTGGAAGTGAACTTGGCGAGTGCGCCTTTTGCCACACACTCGTTTTCCCAGGGTCAACGTTTGGTCAAACTGGCGGTTTCGTCTGCCGTGCCTGACGGTGACGGGAAGTACCGGATCGGCGTCACAGCGCCGCCGAGTGGGACAGTGGCACCGCCGGGGTATTACATGGCTTTTGCGGTGAACCAAGGCGTGCCCAGCGTTGCCAAGTGGATACACGTGGCGTAG 1608 0.5665 MDNVSSYLACFLLLLFLTHARADLPGTWELLVPDAGVASMHTAVTRFNTAVLLDRTNIGPSRKLLPKGNCRYDRNDALLKRDCYAHSVHLDLQTNQVRPLKILTDTWCSSGQFLPDGTLLQTGGDLDGLKKIRKFSPCDASGTCDWEELNDVELAEGRWYATNQILPDGSVIIIGGRGSNTVEFFPPRKNGAVSFPFLSETEDTQMDNLYPYVHLLPNGHLFVFANTRSVMYDFTRHVIVKEYPKLEGGPRNYPSAGSSAMLALQGDYSTAEIVVCGGAQYGAFLMQSTDTPAHGSCGRILAVGDDENPKWEMEDMPFGRIMGDMVMLPNGDVLIINGAMSGTQGFESARNPCLNPVLYRPDQPVGLRFMVLNPGTVPRMYHATANLLPDGRVLLAGSNPHVLYRFDAEFPTELRVEAFSPEYLSADRANLRPVIEEVPETVRFGGSFDVVVSVSLPVVGIVEVNLASAPFATHSFSQGQRLVKLAVSSAVPDGDGKYRIGVTAPPSGTVAPPGYYMAFAVNQGVPSVAKWIHVA 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01432 535 SUPERFAMILY E set domains 430 534 IPR014756 -
Spst4g01432 535 Pfam Glyoxal oxidase N-terminus 40 278 IPR009880 -
Spst4g01432 535 SUPERFAMILY Galactose oxidase, central domain 87 425 IPR011043 -
Spst4g01432 535 PANTHER SECRETED PROTEIN-RELATED 12 534 - -
Spst4g01432 535 Gene3D - 23 431 IPR037293 -
Spst4g01432 535 CDD E_set_GO_C 429 534 IPR015202 -
Spst4g01432 535 FunFam Aldehyde oxidase GLOX 22 430 - -
Spst4g01432 535 Gene3D Immunoglobulins 432 535 IPR013783 -
Spst4g01432 535 Pfam Galactose oxidase-like, Early set domain 432 534 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01432 Spst-Chr4 52412038 52413645 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01432 - - gmx:100816888 959.518