Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01414 ATGGATTGGCTTAGACGTAGTCTTTCTACGAGTTCAGGGAATACCATAACCCCAAATACCCAAACCAAGTCCAACTCCAAAGTACAACATCAACAAGAAGGAGAAGAAAAAGTATACGGGATTACCGAGGAACTCATCAACCACGTCAAGTCCTTCACGATTGACACATTTAAGAATTTCCCTCTCAAAGATGAAGATGAAGGAAGTTATGGGGAAGAAACTCAATCCTCTTCAAGCAAAGTTCGAAAGGATCTCTCCCAGTGGCAGGAGAGACATGCAATCCTCGTTCTCTCAAGAGTAAAGGAAATATCTCAACTGAGATATGTACTGTGTCCTCGCCATTTGAAGGAAAATCAATTCTGGAGAATTTACTTTAAGCTTGCCAGGAGCCATGTTCTCGAATATGAGCTTCGCCACATACAACAGGAGAAACTGAAGCGGATGGCAATAGAAGATGAGAAATCTTCAAGTAACAACTCATATGAAGTTGAAATGGCAGAGACAAAGCATGGCATCTTTATTGAGGCTCAGCTACCCTCTGAATGA 546 0.4176 MDWLRRSLSTSSGNTITPNTQTKSNSKVQHQQEGEEKVYGITEELINHVKSFTIDTFKNFPLKDEDEGSYGEETQSSSSKVRKDLSQWQERHAILVLSRVKEISQLRYVLCPRHLKENQFWRIYFKLARSHVLEYELRHIQQEKLKRMAIEDEKSSSNNSYEVEMAETKHGIFIEAQLPSE 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01414 181 SUPERFAMILY BSD domain-like 40 137 IPR035925 -
Spst4g01414 181 SMART wurzfinal6 80 132 IPR005607 -
Spst4g01414 181 PANTHER BSD DOMAIN-CONTAINING PROTEIN 7 169 - -
Spst4g01414 181 MobiDBLite consensus disorder prediction 1 34 - -
Spst4g01414 181 Gene3D BSD domain 22 144 IPR035925 -
Spst4g01414 181 MobiDBLite consensus disorder prediction 1 28 - -
Spst4g01414 181 ProSiteProfiles BSD domain profile. 73 132 IPR005607 -
Spst4g01414 181 Pfam BSD domain 86 136 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01414 Spst-Chr4 52020275 52030278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01414 39 167 EF-hand Containing Proteins AT1G69030 47.287 4.63e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01414 - - aprc:113851362 280.796