Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01412 ATGAGCACCACCTGTTCAACGAAAATGGCCAAAGAACTCCCCCTACAGCTACATCTCCAACTGGGTCTCTGTCTCTTTCCCCACTTCACTGCTACTACTACCTTAAACCCACTACTACTATACTTTTATCTTTCCTTTCACATTCCGTTCTGTTTAACTACCTTGTTTTTTTTTTCACTTCCTATGGATCGTACTGACAAGCAGCAGCAGTTATCCTTGGCCAAGGGTACAAGGCAGAGATACAATGAATGGATTTTTCGTGATGTACCGAGTGATATAACAATAGAAGTGAATGGAGGAGCATTTTCATTGCACAAGTTTCCTCTTGTCTCCAGAAGTGGGAGAATAAGGAGGATAGTTGCAGAACACAGGGATGCTGACATCTCAAGAGTTGAGCTTCTTAATCTACCAGGAGGTGCCGAATGCTTTGAGTTGGCAGCGAAATTTTGTTATGGTATTAACTTTGAGATTACATCCACAAATGTTGCTCAGCTATGTTGTGTCTCTGATTACCTTGAAATGACTGAAGACTTTTCAAAAGACAACCTTGGCTCGCGTGCCGAGGAATACCTTGAAAGTATAGTGTGCAAGAATCTTGAAATGTGTCTTGAAGTATTGCAACAATGTGAGAGCCTGCTTCCTCTTGCTGATGAGCTAAAAGTAGTTAGCCGCTGCATTGATGCAATAGCTTCAAAAGCATGTGCAGAACAAATAGCTTCTAGTTTCTCAAGATTAGAGTATAGCAGCTCAGGAAGGTTACACATGAGCAGGCAAGCCAAATGCGATGGTGATTGGTGGATTGAAGATCTTTCTGTTCTGAGAATTGATATGTATCAAAGAGTCATAACGGCCATGAAATGTCGTGGGGTTCGGCCAGAGAGTATTGGTGCTTCCCTTGTGAATTATGCACAGAAAGAATTGACAAAGAAATCCAGCTTGTGGAATCCATCTAGCCAAACTAAGATTGATTCAAATTCCAGTTTGCATGAAAAGCTTGTGGTTGAGACCATTGTAAGCCTTTTGCCTGTTGAGAAACTTGCTGTTCCAATCAATTTCCTTTTCGGGCTTCTGCGAAGTGCAGTGATGCTTGATTGTACAATTGCTTGTAGACTTGACTTGGAAAGAAGGATTGGATCGCAGCTAGATGTTGCCACCCTTGATGATATTTTGATTCCATCGTTCAGGCATGCCGGTGATACCTTGTTTGATGTTGACACAGTTCATAGAATTTTGGTAAATTTCTGTCAGCAGGATGATAGTGAAGAAGATCCAGAAGATGCATCTGTTTTTGAATCTGACAGCCCTCGTTCACCCTCCCAAACCGCACTAGTTAAAGTGTCAAAACTAGTGGACAACTACCTTGCTGAAATTGCCCCGGATGCAAACCTTAAACTTTCCAAGTTTTTGGTCATTTCAGAAACCTTGCCTGCACATGCCCGCACAGTTCATGATGGTTTATATCGGGCAATTGATATTTACTTAAAAGCTCACCAAGGTTTGTCAGATTTGGACAAGAAGAAACTATGCAAATTGATTGACTTTCAAAAGCTTACTCAAGAAGCTGGAGCACACGCTGCGCAAAATGAGCGCCTTCCTCTCCAATCAATAGTGCAAGTTCTGTATTTTGAGCAGCTAAGACTTAGAAATTCTTTGTCCTGCTCCTACGGGGAAGATGACCCCAAGCCAATCCAACAGTCATGGCGCATAAATAGTGGTGCTCTAAGTGCAGCAATGTCTCCACGAGACAACTATGCATCATTGCGACGTGAAAACCGTGAGCTTAAACTTGAATTGGCTCGCCTAAGAATGAGACTAAATGATCTAGAGAGGGAACATGCTTGCATGAAGAGGGACATGGCTAAGTCCGGCTCACGTAAATTTATGACTTCTTTCTCCAAAAAGATTGGTAAGCTCAGTCTTTTTGGGCATAGTTCTTCTAGAGGATCAAGTTCTCCATCCAAAAATTCTCAAAGAACATATTCAAAGGTGATCGAGAGAACCTGTGCTAGCACAGAGTAG 2019 0.4215 MSTTCSTKMAKELPLQLHLQLGLCLFPHFTATTTLNPLLLYFYLSFHIPFCLTTLFFFSLPMDRTDKQQQLSLAKGTRQRYNEWIFRDVPSDITIEVNGGAFSLHKFPLVSRSGRIRRIVAEHRDADISRVELLNLPGGAECFELAAKFCYGINFEITSTNVAQLCCVSDYLEMTEDFSKDNLGSRAEEYLESIVCKNLEMCLEVLQQCESLLPLADELKVVSRCIDAIASKACAEQIASSFSRLEYSSSGRLHMSRQAKCDGDWWIEDLSVLRIDMYQRVITAMKCRGVRPESIGASLVNYAQKELTKKSSLWNPSSQTKIDSNSSLHEKLVVETIVSLLPVEKLAVPINFLFGLLRSAVMLDCTIACRLDLERRIGSQLDVATLDDILIPSFRHAGDTLFDVDTVHRILVNFCQQDDSEEDPEDASVFESDSPRSPSQTALVKVSKLVDNYLAEIAPDANLKLSKFLVISETLPAHARTVHDGLYRAIDIYLKAHQGLSDLDKKKLCKLIDFQKLTQEAGAHAAQNERLPLQSIVQVLYFEQLRLRNSLSCSYGEDDPKPIQQSWRINSGALSAAMSPRDNYASLRRENRELKLELARLRMRLNDLEREHACMKRDMAKSGSRKFMTSFSKKIGKLSLFGHSSSRGSSSPSKNSQRTYSKVIERTCASTE 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01412 672 ProSiteProfiles NPH3 domain profile. 264 546 IPR027356 -
Spst4g01412 672 MobiDBLite consensus disorder prediction 640 672 - -
Spst4g01412 672 MobiDBLite consensus disorder prediction 642 672 - -
Spst4g01412 672 Gene3D Potassium Channel Kv1.1; Chain A 66 243 IPR011333 -
Spst4g01412 672 Pfam NPH3 family 264 521 IPR027356 -
Spst4g01412 672 ProSiteProfiles BTB domain profile. 91 159 IPR000210 GO:0005515
Spst4g01412 672 PANTHER OS12G0117600 PROTEIN 88 646 IPR043454 -
Spst4g01412 672 Coils Coil 584 618 - -
Spst4g01412 672 Pfam BTB/POZ domain 90 176 IPR000210 GO:0005515
Spst4g01412 672 SUPERFAMILY POZ domain 77 176 IPR011333 -
Spst4g01412 672 MobiDBLite consensus disorder prediction 418 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01412 Spst-Chr4 51998312 52001962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01412 82 621 EF-hand Containing Proteins AT3G44820 35.315 2.05e-111 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01412 - - gmx:100799524 1127.08