Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01408 ATGATTGACAGGAAGAATCTTACTGATTTGAAGGTCTATGCCATTGATGTTGATGAGGCTGATGAGCTTGATGATGCTTTGAGTGCAACAAAGTTGCAAGATGGCCGGATTAAAGTTTGGATACATGTTGCTGATCCAACTAGATATGTACAACCTGGAAGTATAGTGGACAGAGAGGCTATGAGAAGAGGAACTTCTGTTTTCTTGCCCACTGCTACATATTCTATGTTTCCTGAAAATCTTGCCATGGGGGGCATGAGTTTGAGACAAGGAGAGCCTTGTAATGCAGTTACTGTATCAGCCGTGCTGCATAATGATGGCAGCATTGCAGAATATTCAGTGTTTAACTCGGTAATCAAACCAACATACATGCTGACATACGAGGGTGCATCTGAGCTACTCCACTTGAACCTTCAGGAGGAGGGTGAACTCAGAATTTTGTCTGAGGCTGCAAAACTGCGGTCAAATTGGCGACGTCAACAGGGTGCAATTGAGACAGCAACATTAGATACTCGAATTAAAGTATCTAATCCTGAGGATCCAGAGCCATCACTAAAACTTTATGTGGAAAACCAGGCAGATCCTGCTATGCGATTAGTCTTTGAGATGATGATACTCTGTGGAGAAGCTATTGCCGCATTTGGATCTAAGAATGACATTCCCTTACCATACAGGGGACAGCCCCAATCAGATATAAATGTTTCTGAATTTTCCCATCTTCCAGAAGGACCCGTCAGGAGCTTCGCACTAGTCAGAGTAATGCGAGCTGCTGAAATTGATTTCAGGAAGCCTGCACGCCATGGTGTTTTGGGGATTCCTGGTTATGTTCAGTTTACATCTCCCATCCGTAGATATCTGGATCTTCTTGCACATTATCAGGTAAAGGCATTCCTTAGAGGCGAGCCTCCACCCTTTACAGCTGGTAAGCTTGAAGGGATTGCAGCTACTGTTAATGAGAATGTTAGAACAGTGAGGAAACTCTCAAGCAGCAGTCTTCGATACTGGATATTAGAATATTTACGAAGACAACCGAAAGAGAGACCCTATCGTGCATTGGTTCTTAGATTTTTGAAAGATCGAATTGCAGCTCTTTTATTGCTTGAGGTTGGATTTCAAGCTTCTGCCTGGGTCCCTGTTGGATCACAGATAGGGGATGAAGTATTAGTCAAAGTGGAAGAAGCGCATCCACGTGATGATATTCTATTCCTGAAGGAGGTCGTAAAAGAGTGA 1230 0.4341 MIDRKNLTDLKVYAIDVDEADELDDALSATKLQDGRIKVWIHVADPTRYVQPGSIVDREAMRRGTSVFLPTATYSMFPENLAMGGMSLRQGEPCNAVTVSAVLHNDGSIAEYSVFNSVIKPTYMLTYEGASELLHLNLQEEGELRILSEAAKLRSNWRRQQGAIETATLDTRIKVSNPEDPEPSLKLYVENQADPAMRLVFEMMILCGEAIAAFGSKNDIPLPYRGQPQSDINVSEFSHLPEGPVRSFALVRVMRAAEIDFRKPARHGVLGIPGYVQFTSPIRRYLDLLAHYQVKAFLRGEPPPFTAGKLEGIAATVNENVRTVRKLSSSSLRYWILEYLRRQPKERPYRALVLRFLKDRIAALLLLEVGFQASAWVPVGSQIGDEVLVKVEEAHPRDDILFLKEVVKE 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01408 409 SMART RNB_2 4 300 IPR001900 GO:0003723|GO:0004540
Spst4g01408 409 Pfam RNB domain 4 299 IPR001900 GO:0003723|GO:0004540
Spst4g01408 409 SUPERFAMILY Nucleic acid-binding proteins 3 343 IPR012340 -
Spst4g01408 409 PANTHER RIBONUCLEASE 3 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01408 Spst-Chr4 51901587 51906793 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01408 K01147 - gmx:100803243 767.303