Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01352 ATGAAGAAACTTGAGCATTTTTCAGTCCAGAAGGTTACAGGGGATGGGCGGTGTCTATTTCGCGCACTGGTCAAAGGAATGGCTTACAATAAGGGAACAGTTCTCAATCAACGTGAGGAGAGAGAAAATGCAGAATTACATTATGTGAAACAGTTAGGAATGGCTGTGAAAGAAGTTCTATGTGAAAATGAAGGTGAACGCAATTTATATGAAGAAGCCCTGATTGCAATCACAGTTGATGAGCCTCTAAAACGTTACTGCCAACGGATTGTCCGACCTGATTTCTGGGGAGGAGAATCAGAGCTACTGGTACTCTCAAAGTTATGTAAGCAGCCAATCATTGTGTACATACCAGAGCATGAGTTCTGTTCTGCGCTTGTAAAAATATTACCTGGGAGTGCTCAATTTGTTGAATATGATAGCATAATGACTGGATATAATGCTACTTGTAGGATATAA 459 0.4052 MKKLEHFSVQKVTGDGRCLFRALVKGMAYNKGTVLNQREERENAELHYVKQLGMAVKEVLCENEGERNLYEEALIAITVDEPLKRYCQRIVRPDFWGGESELLVLSKLCKQPIIVYIPEHEFCSALVKILPGSAQFVEYDSIMTGYNATCRI 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01352 152 ProSiteProfiles OTU domain profile. 7 145 IPR003323 -
Spst4g01352 152 Pfam OTU-like cysteine protease 13 117 IPR003323 -
Spst4g01352 152 Gene3D - 1 143 - -
Spst4g01352 152 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 7 124 - -
Spst4g01352 152 FunFam Cysteine proteinases superfamily protein 1 144 - -
Spst4g01352 152 SUPERFAMILY Cysteine proteinases 6 123 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01352 Spst-Chr4 50922069 50925522 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01352 - - gmx:100807522 219.164