Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01349 ATGATGATGGAAGGAGCGAGCAATGGAGGGATGTTGTACCACGAAGTGCAGGAGTCGAAGCTGTGTGCGGTGCATTGCGTGAACACCGTTTTGCAGGGTCCTTTCTTCTCGGAGTTCGATTTGGCCGCACTCGCGTCCGATCTCGATCGCAAGGAGCGCCAGGTCATGCTCCCCGCACTCTCCTCAGCCGATTTCGAATCGCACAATGTGTCGCTCGACGGTGATTTCAGCATCCAGGTTTTACAAAAGGCATTGGAAGTTTGGGACCTTCAAGTTATCCCTCTTGACTCGCCAGTTGCTGAGCCTGCCCAGATTGACCCAGAGCTGGAAAATGCCTTCATTTGTCATTTACAAGATCATTGGTTTTGTATCCGTAAAGTGAATGGGGAGTGGTATAATTTTGACAGTCTCTATGCAGCGCCACAACACCTTTCCAAGTTTTACCTCTCTGCGTATCTTGACTCTTTGAAAGGCTTTGGGTGGAGCATATTCCTGGTTAGAGGAAATTTTCCAAAAGAGTTCCCCATCTCCTCATCTGAAGCTTCTAATGGTTTTGGGCAGTGGCTTTCGCCTGATGATGCTGAGAGAATAACTAAATCTTGCAACTCAGTGCAGGCTCCGCACCAGAGAGTTAACGAAAGGCAACAACATTATGATCAGTTTCTTTCTCACGGGGAAGCTGAAATGTTATTAGACATGGAAGATGAGGATCTAAGGGCTGCAATTGCAGCTAGTCTGATGGATTCGTGCCCAATTGTGACCAATGCTGAAGCCAGTACTCCCCAAAATGATTATCAAAGTAGTAAACAAGTCGCCAGTACTGAAGCTACCCCTCTAAATGATCAACATCCAGAACAAGCAATAACTACTGAAGCTACCCCTCTAAATGATCAACACTCCAAACAAGTGGAACCCATTGAAGCTACTCCACCTCTCAATGCTCCAAGCAACAAACATGTGGCAGCTATTGATGCTCGTTCTCCACTAAATGATCAAAACAGCGAAGAAGCGGCATCTACTACAGGTGATAACTCTCAAGATGAAAACCAGAATAAAGAGAAAGCTGTCTAA 1071 0.4622 MMMEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQVMLPALSSADFESHNVSLDGDFSIQVLQKALEVWDLQVIPLDSPVAEPAQIDPELENAFICHLQDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFLVRGNFPKEFPISSSEASNGFGQWLSPDDAERITKSCNSVQAPHQRVNERQQHYDQFLSHGEAEMLLDMEDEDLRAAIAASLMDSCPIVTNAEASTPQNDYQSSKQVASTEATPLNDQHPEQAITTEATPLNDQHSKQVEPIEATPPLNAPSNKHVAAIDARSPLNDQNSEEAASTTGDNSQDENQNKEKAV 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01349 356 ProSiteProfiles Josephin domain profile. 9 181 IPR006155 GO:0004843|GO:0016579
Spst4g01349 356 SMART Josephin_2 16 169 IPR006155 GO:0004843|GO:0016579
Spst4g01349 356 MobiDBLite consensus disorder prediction 327 346 - -
Spst4g01349 356 Gene3D - 35 73 - -
Spst4g01349 356 PRINTS Josephin signature 107 126 - -
Spst4g01349 356 PRINTS Josephin signature 13 36 - -
Spst4g01349 356 PRINTS Josephin signature 152 171 - -
Spst4g01349 356 PRINTS Josephin signature 128 148 - -
Spst4g01349 356 FunFam ataxin-3 homolog 67 171 - -
Spst4g01349 356 PANTHER ATAXIN-3-RELATED 3 346 IPR033865 GO:0004843|GO:0016579
Spst4g01349 356 Gene3D - 21 171 - -
Spst4g01349 356 MobiDBLite consensus disorder prediction 257 356 - -
Spst4g01349 356 Pfam Josephin 17 167 IPR006155 GO:0004843|GO:0016579
Spst4g01349 356 MobiDBLite consensus disorder prediction 257 303 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01349 K11863 - gmx:100808056 627.476