Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01348 ATGGGTTCCTCTGATCGTTTGTTCAACCGGCAAAGAACTCTCCATGAGATCCTTGGTGGTGGTCAAGTTGCAGATTTAATACTGTGGCGACGGAAGAACCTAACGATGGGGATATTGTTGGTCACGCTAGCTGTTTGGGTTGTGTTTGAAAGATCTGGTTATACACTTCTGTCTCTTGTTTCCAATGTTTTCCTCCTCCTCATTGTCATTCTTTTCCTTTGGGCCAAGTCAGCTGCGATTCTCAACAGACCTGCTCCACCTCTACCACAGTTGCATCTGTCAGAGGAAATGGCAAACGAAGTGACAACTTTTATCCGCACAAGAGTTAATGATACGTTATCAGTTTCTCAAGATATTGCCCTTGGTAAAGACTCAAGGCTATTCCTGAAAGTAGCTGCATACCTCTGGCTAATTTCTATTATTGGTGGCTTGACTGATTTCCTTACTCTGGCATACACCAGTCTTTTTATTGTTCTTACAGTACCAGCAATCTATGAAAGATATGAAGAATACATAGACATGTACATTTTGAAGGTTTACAGAAAACTGTGCTTTTTACATGTGAAAATCAATGAGAAATATGTCAGCAGAGTCCATAACTGGATTCTGGAGAAGAAAAAGCTGAGTTGA 630 0.4095 MGSSDRLFNRQRTLHEILGGGQVADLILWRRKNLTMGILLVTLAVWVVFERSGYTLLSLVSNVFLLLIVILFLWAKSAAILNRPAPPLPQLHLSEEMANEVTTFIRTRVNDTLSVSQDIALGKDSRLFLKVAAYLWLISIIGGLTDFLTLAYTSLFIVLTVPAIYERYEEYIDMYILKVYRKLCFLHVKINEKYVSRVHNWILEKKKLS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01348 209 ProSiteProfiles Reticulon domain profile. 23 209 IPR003388 -
Spst4g01348 209 PANTHER RETICULON 5 198 - -
Spst4g01348 209 Pfam Reticulon 23 178 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01348 Spst-Chr4 50859329 50861456 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01348 K20723 - gmx:100809125 368.622