Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01346 ATGAACCAGATTCCGTGGCCAACGATAGGGGTGGTGATTGCGTGGTACAGTTCCAACATCGGGGTGCTCCTTCTCAACAAGTACTTGCTCACCAACTATGGCTTCCGGTTCCCGGTTTTCCTCACCACGTGTCACATGCTCCTGTGTTCGTTCCTCAGCTACGTTATTTCCGTCACCGATATGGTTCCGTTGCAGACCCTGCGCTCCCAAGCCCAGTTCTGGAAGATCGTCGCGCTCAGTGTCGTTTTCTCTTTCTCCGTCGTTTGTGGCAATATCTCGCTCAGGTTCATACCGGTGTCGTTTAACCAAGCCATCGGCGCCACCACCCCATTCTTCACCGCCGTTTTTGCCTACGCCGTCAGCAGCAAGAGGGAAGCCTGGGTTACGTATGCCACGCTCTTGCCTGTTGTCACAGGGGTCATCATTGCCAGTGGGGGTGAACCAAGTTTTCATCTGTTTGGATTTGTAATCTGTATTTCATCGACCGCTGCCAGAGCATTTAAATCAGTGCTTCAAGATATTTTGTTGTCCTCAGAGGGAGAAAAGTTGAATTCTATGAACCTGCTGCTTTACATGGCTCCTATAGCAGTGATGGTCTTACTTCCTGCGACATTGTTTATGGAGGGAAATGTTATTGGGATCACAATAGAACTTGCCAGAAAGGATACCAGAATATTTTGGTTTCTGCTTCTCAGTTCTTCTCTTGCATATTTTGTGAACCTCACTAATTTTTTGGTGACGAAACATACAAGTGCACTAACTCTTCAGGTTTTGGGAAATGCAAAGGGGGCAGTTGCTGTGGTGGTCTCAATTTTGATATTCAAAAACCCCATTTCAATGATAGGAATGCTTGGCTATGCACTCACTGTCATTGGAGTTATATTGTACAGTGAAACCAAGAAGAGATATAGCAAAAATTAG 921 0.4636 MNQIPWPTIGVVIAWYSSNIGVLLLNKYLLTNYGFRFPVFLTTCHMLLCSFLSYVISVTDMVPLQTLRSQAQFWKIVALSVVFSFSVVCGNISLRFIPVSFNQAIGATTPFFTAVFAYAVSSKREAWVTYATLLPVVTGVIIASGGEPSFHLFGFVICISSTAARAFKSVLQDILLSSEGEKLNSMNLLLYMAPIAVMVLLPATLFMEGNVIGITIELARKDTRIFWFLLLSSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFKNPISMIGMLGYALTVIGVILYSETKKRYSKN 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01346 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 146 - -
Spst4g01346 306 PANTHER SOLUTE CARRIER FAMILY 35 9 301 - -
Spst4g01346 306 Pfam Triose-phosphate Transporter family 11 297 IPR004853 -
Spst4g01346 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 195 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01346 Spst-Chr4 50843305 50846537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01346 8 302 Organic Solute Cotransporters AT3G11320 79.054 2.80e-169 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01346 - - gmx:100799632 531.561