Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01297 ATGTCTGCATCATCAAGGAAGGCAGAGCGTGCAATCTATGGAGCCATATTCTGCTTTGCTTTAGGGAATAGTGGTGAAAAGCTTGCAGAATATTTTCTCCAATGTCAGTTGCAAGAGAAAATCAAATCCAAAAAACCGGACCACCACACGGGTAATACAATTCGTACCAATATCTGGTTGTATGCTCCATCCATAGTCGTATATCTGATAACAGTTTATAGTGCCCGTACCTTTAAAACCGACGTGGAAAGCTTCAGATTCACTGCACTTCTCATGGGAGGGACGTTTCTGTTGTTCATCTTCGGCTGTTTGTGGTACAGACGCGAAAAACTACCCGCAGAGAGCAATCTACGAAAGATTCAAAGAATCTGCAAAGCTGGTTTACGTAAACGAAAATCAGAATTCCCAGCATCAGGAGATTGTTATTACTGGAAGGATTACAAGCAGGACCATTTGTATAAGCATGGTGAAGGAGTAAGGTTATTGCCGCGAGTTCCAAGGCAGTTCAGGTGGTTGGACAAAGCAGCTATAGTCAAAGCAGAAGATCCTGAAGAATTGAGTGCTGAGATGCAAGAAAAGAAAGGAAACCTTTGCACCGTGAAGGAGGTGAGGGAAGTGAAGAGCCTTGTGCCTATGATTTACCTCTGCATTGCCTTCTTTGCTTACAGTTTACTTTTGGCTTGTGGGAACACTTTCTTTATTGCACAATCGAACGCCGCGGAGATATCATCACGATTCATCTGCTTTATTATCCGTGTTGCATTTGGATGCTTCTGGAAGTTTGAAGGTATGGAAAGTGGTGGTGGTGGTAGGTTGATGAGAAAAGCGGGATATATTATAAGGATTGGTTTTGGCATGTCTTGTGCGGTAATTTGCGGTGTGGTAGCATGGCATGCTGAGGGTCGGAGGTTGTCGTTTATAAATGGGCAGCCACGACAGGGTGATAGAAACTCGACAACGGCGGTGGTTCCGCAGTTTGCGTTGCTGGGAACGTCGGTGGGGCTTGTTGAAGGTGGGTTAGAGAGTTTGTTCGAAGCTCACGTAGCGATGTCAATGTGGGGTTATAGGGATTCGTTTATTGAATTGGTGTCTGGTGTTGGGCAACTTCTGATTATACCATTTATCTTCAGTAGCTGGGTCAAGACCACTGTGGAAGATAGCCGTTTGGATAAACTGTATCTGATGTTGGCGATTTTGAACGGCATTTTCCTTTTGGGTTTCGGATACTACTCCGTTAGATATGCATACTGGGAAGAATATCCAGAGGATGAAAAAGCTCCGGTGGAGGGAAGATCGGAAAATGTTCCTCGACCACACTCTGAGGATTCTTTTTCCAGAATATAA 1344 0.4442 MSASSRKAERAIYGAIFCFALGNSGEKLAEYFLQCQLQEKIKSKKPDHHTGNTIRTNIWLYAPSIVVYLITVYSARTFKTDVESFRFTALLMGGTFLLFIFGCLWYRREKLPAESNLRKIQRICKAGLRKRKSEFPASGDCYYWKDYKQDHLYKHGEGVRLLPRVPRQFRWLDKAAIVKAEDPEELSAEMQEKKGNLCTVKEVREVKSLVPMIYLCIAFFAYSLLLACGNTFFIAQSNAAEISSRFICFIIRVAFGCFWKFEGMESGGGGRLMRKAGYIIRIGFGMSCAVICGVVAWHAEGRRLSFINGQPRQGDRNSTTAVVPQFALLGTSVGLVEGGLESLFEAHVAMSMWGYRDSFIELVSGVGQLLIIPFIFSSWVKTTVEDSRLDKLYLMLAILNGIFLLGFGYYSVRYAYWEEYPEDEKAPVEGRSENVPRPHSEDSFSRI 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01297 447 SUPERFAMILY MFS general substrate transporter 61 412 IPR036259 -
Spst4g01297 447 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 414 - -
Spst4g01297 447 MobiDBLite consensus disorder prediction 424 447 - -
Spst4g01297 447 Pfam POT family 85 245 IPR000109 GO:0016020|GO:0022857|GO:0055085
Spst4g01297 447 Gene3D MFS general substrate transporter like domains 1 421 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01297 Spst-Chr4 49585783 49587197 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01297 1 421 Organic Solute Cotransporters AT3G53960 25.221 3.64e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01297 K26562 - gmx:106798051 447.588