Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01289 ATGGGCAAAACCAAAATCTTTCATTCCCAGGGTATAATGCTGCTATGGACATCTACATCAGACACACCTTCTCAATTTCATACATTCTATGCAGCTATAATCTTCCTTGCATTAGGGAACAGTGGTCAAAAGCTTACAGAAAATTTTCTTGAATACCAATTGGAAGAGAAAATTGAAGCGAGACAAGCAGTAGGTGGTGGAAGCACACACAAGAAGAAAGAGCTAGAGTTCATGGATAAAGTGCTTATTAGAAGCTGGATGTACGCTCCATGTGTTGTTGGATATATCATCACAATTATTTATGCCTTCGTCGTTGATGACAAGTACGAGCACACATTCCGATTCGCGGCACTTTTCATGGGTGGCACTTACATGGTGTTCCTCGCTGGTTCTGCGTGGTACAGCCGCGAAGAATTGCCTGTTGAAAGCAATCTACGCAAGATCTACAGAATCCTCAAAGCAGCTTTATGGAAACGGGGTGCAAAATATCCAACCTCGCCGAGTAGATATTACTGGAAGGGTTGTAAGCAAGATCATCATTATAAACACCGTGAAGGAGTAAGGTTAGTGCCACCAGTTCCACGGTTATGCCGGTGGTTGGACAAAGCAGCTATACTTGAACCAGAAGATTCCAGAGTGGGTGTGGAGGTGCAAGAAAAGAATATGAAGCTTTGCACGGTAAAGGACGTGAGGGAAGTGAAGAGCCTGGTTCCTATGTTTTACCTGGGCTTTGCATTCTTTGGTTACAGTTTACTCGTGGCCACCGAGAACACTTTTTTTGTTGCACAAGCAAGCAACATGACATCAAAGATTACTAAAAATGATAATGATATCTTTCTTCTCTTTTTGATCAAGGAGGGCGTGAGTGATGTGTCACGGTTCATCTGTTTTCTTATCGGTTGTGCATTTCGACGCTTAAAACACTTCAAATTTATTGACAACGTGTGCAACAAGAAAGCAGCAATTGTAAGGATTGGTTTTGGCATGGTTTTTGCAGTGATTTGTAGCCTCATAGCTTGGAAAGTTGAGGTTGGTAGATTGAACGTAAACAAGGAGATGGGTTACATCGAGGAAGGCAGAAACTCCACAGTGGCCTTGGTTCCGCAATTTTCATTGATGGGAATCACTGAGGGGCTTGTTGAGGGTGGAATGGCGAGTTTGTTCCGTAGGCACGTGGCGAAATCAATGTGGAGTTTTGGGGATGCGTTTGGGGGATTGGTGATTGGTAGTGGAAAACTCTTGATCATTCCACTTGTCTTAGGTATCCCTAGTTGGTTCAAGGATACTTTGAACGCTAGTCGTTTGGACAGGTTCTATCTGATGTTGGGAATATTGAACGCTGTGTTTCTTCTGGTTTTTGCTTACTACTCCTTCATGTATGCATACAAAGTAGTATGCCCTGAAGATGATCAACCAGACTCAGAAAGCTCCCAAGTTGAAGAATCGAAGGGGGAGAATCCGGATTTCGTTGAAAGTACAGTTGAAATACAGTTGGAAAACAATGGTAGCCAACAGAGACTTTGA 1524 0.4298 MGKTKIFHSQGIMLLWTSTSDTPSQFHTFYAAIIFLALGNSGQKLTENFLEYQLEEKIEARQAVGGGSTHKKKELEFMDKVLIRSWMYAPCVVGYIITIIYAFVVDDKYEHTFRFAALFMGGTYMVFLAGSAWYSREELPVESNLRKIYRILKAALWKRGAKYPTSPSRYYWKGCKQDHHYKHREGVRLVPPVPRLCRWLDKAAILEPEDSRVGVEVQEKNMKLCTVKDVREVKSLVPMFYLGFAFFGYSLLVATENTFFVAQASNMTSKITKNDNDIFLLFLIKEGVSDVSRFICFLIGCAFRRLKHFKFIDNVCNKKAAIVRIGFGMVFAVICSLIAWKVEVGRLNVNKEMGYIEEGRNSTVALVPQFSLMGITEGLVEGGMASLFRRHVAKSMWSFGDAFGGLVIGSGKLLIIPLVLGIPSWFKDTLNASRLDRFYLMLGILNAVFLLVFAYYSFMYAYKVVCPEDDQPDSESSQVEESKGENPDFVESTVEIQLENNGSQQRL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01289 507 MobiDBLite consensus disorder prediction 469 490 - -
Spst4g01289 507 Pfam POT family 23 404 IPR000109 GO:0016020|GO:0022857|GO:0055085
Spst4g01289 507 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 9 461 - -
Spst4g01289 507 Gene3D MFS general substrate transporter like domains 5 466 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01289 Spst-Chr4 49487442 49488965 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01289 23 486 Organic Solute Cotransporters AT3G53960 25.673 8.57e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01289 K26562 - gmx:106798051 458.373