Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01249 ATGTTCTTCTCCTTCCACACAGAGCGTTTCGTTTCGATTCGATTCCCGGTGGTTTCAATGGGGAGCGAAGAGGAGAACAACGAATTCTACCTCCGCTACTACGTCGGTCACAAGGGAAAGTTCGGTCACGAGTTTTTGGAGTTCGAGTTCCGCCCCGACGGGAAGCTCCGCTACGCCAACAACTCCAACTACAAAAACGACACCATTATTCGCAAGGAGGTTTACCTCACCCCCGCCGTTCTCCGCGAGTGCCGTCGCATCATCACCGAAAGCGAGATTATGAAGGAAGATGATAACAACTGGCCGGAACCGGACCGGGTGGGGCGACAGGAGCTGGAGATTGTGATGGGGAATGAGCACATATCGTTTACGACCTCGAAGATTGGGTCTTTGGTGGATGTTCAGAGTAGTGCTGATCCGGAAGGGCTTCGCATCTTTTACTACCTTGTCCAGGATTTGAAGTGCTTTGTCTTCTCTCTCATTTCACTTCACTTCAAGATCAAGCCTATCTAA 513 0.5068 MFFSFHTERFVSIRFPVVSMGSEEENNEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTIIRKEVYLTPAVLRECRRIITESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSADPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01249 170 CDD Mago_nashi 28 170 IPR004023 GO:0008380|GO:0035145
Spst4g01249 170 Pfam Mago nashi protein 29 170 IPR004023 GO:0008380|GO:0035145
Spst4g01249 170 SUPERFAMILY Mago nashi protein 27 170 IPR036605 GO:0005634
Spst4g01249 170 Gene3D Mago nashi 26 169 IPR036605 GO:0005634
Spst4g01249 170 PANTHER PROTEIN MAGO NASHI HOMOLOG 20 170 IPR004023 GO:0008380|GO:0035145
Spst4g01249 170 FunFam Protein mago nashi homolog 26 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01249 Spst-Chr4 47928543 47931584 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01249 K12877 - gmx:100305742 308.531