Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01235 ATGGCAGAGGAGGAGAGTCCAAGTGTGATGCCAAAAGTGATCACTTTCCTCTCCTCCATGCTGGAAAGGGTGGCTGAGTCAAACGATCAGAACCAGCAACTCCAACAGCACCACAAGATCTCAGTGTTCCATGGCTTGACACGACCCAACATCTCAATTCAGTGCTACCTTGAGAGAATCTTCAAGTATGCCAATTGCAGCCCCTCGTGCTTCATTGTTGCCTATGTCTACCTCGATCGTTTCACTCAGAGACAACCCTCTCTCCCCATCAACTCCTTCAATGTCCATAGATTGTTGATCACAAGTGTCATGGTAGCTGCCAAATTCATGGATGACATGTACTACAACAATGCATACTATGCAAAAGTTGGGGGAATCACCAAAACAGAGATGAATTTTCTTGAGTTGGATTTTCTGTTTGGTTTGGGTTTCCACTTAAATGTGACCCCAGGAACCTTCCAAGCCTACTGTGTCCACCTCCAAAGAGAAATGGTGGTGATGGAACCTCTAAATTTTGCAGAATCCACTCTAACTTTAGGAAAATCATTGAAGACCCACTTGTGCTTCAATGAAGATGAATCTTCTCATCAAAAGCAACAACAGCTAGCAGTTTGA 615 0.4423 MAEEESPSVMPKVITFLSSMLERVAESNDQNQQLQQHHKISVFHGLTRPNISIQCYLERIFKYANCSPSCFIVAYVYLDRFTQRQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYAKVGGITKTEMNFLELDFLFGLGFHLNVTPGTFQAYCVHLQREMVVMEPLNFAESTLTLGKSLKTHLCFNEDESSHQKQQQLAV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01235 204 CDD CYCLIN_AtCycU-like 39 164 - -
Spst4g01235 204 Coils Coil 17 37 - -
Spst4g01235 204 Pfam Cyclin 24 146 IPR013922 GO:0000079|GO:0019901
Spst4g01235 204 PANTHER UNCHARACTERIZED 9 193 IPR013922 GO:0000079|GO:0019901
Spst4g01235 204 SUPERFAMILY Cyclin-like 55 147 IPR036915 -
Spst4g01235 204 PIRSF PREG 1 204 IPR012389 -
Spst4g01235 204 Gene3D - 4 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01235 Spst-Chr4 47197624 47199416 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01235 - - gmx:100305689 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01235 4 47197624 47199416 Spst4g01235 4 47197624 47199416 ECH